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LMJF_34_1000 putative myosin IB heavy chain [ Leishmania major strain Friedlin ]

Gene ID: 5654857, updated on 21-Dec-2023

Summary

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Gene symbol
LMJF_34_1000
Gene description
putative myosin IB heavy chain
Locus tag
LMJF_34_1000
Gene type
protein coding
RNA name
putative myosin IB heavy chain
RefSeq status
PROVISIONAL
Organism
Leishmania major strain Friedlin (strain: Friedlin)
Lineage
Eukaryota; Euglenozoa; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania
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Genomic context

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See LMJF_34_1000 in Genome Data Viewer
Location:
chromosome: 34
Exon count:
1
Sequence:
Chromosome: 34; NC_007286.2 (445059..449180)

Chromosome 34 - NC_007286.2Genomic Context describing neighboring genes Neighboring gene amastin-like protein Neighboring gene p-glycoprotein Neighboring gene conserved hypothetical protein Neighboring gene conserved hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_007286.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the kinetoplastid parasite, Leishmania major. Ivens AC, et al. Science, 2005 Jul 15. PMID 16020728, Free PMC Article
  2. Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania. Rogers MB, et al. Genome Res, 2011 Dec. PMID 22038252, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables microfilament motor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin filament organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle transport along actin filament IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in actin cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in microvillus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of myosin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
putative myosin IB heavy chain

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_007286.2 Reference assembly

    Range
    445059..449180
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001686141.1 → XP_001686193.1  putative myosin IB heavy chain [Leishmania major strain Friedlin]

    See identical proteins and their annotated locations for XP_001686193.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    Q4Q3A5
    Conserved Domains (3) summary
    smart00456
    Location:897 → 931
    WW; Domain with 2 conserved Trp (W) residues
    cd00065
    Location:1065 → 1117
    FYVE_like_SF; FYVE domain like superfamily
    cl22853
    Location:26 → 786
    Motor_domain; Myosin and Kinesin motor domain
Nucleotide Protein
Heading Accession and Version

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