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LMJF_34_0310 conserved hypothetical protein [ Leishmania major strain Friedlin ]

Gene ID: 5654785, updated on 21-Dec-2023

Summary

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Gene symbol
LMJF_34_0310
Gene description
conserved hypothetical protein
Locus tag
LMJF_34_0310
Gene type
protein coding
RNA name
conserved hypothetical protein
RefSeq status
PROVISIONAL
Organism
Leishmania major strain Friedlin (strain: Friedlin)
Lineage
Eukaryota; Euglenozoa; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania
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Genomic context

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Location:
chromosome: 34
Exon count:
1
Sequence:
Chromosome: 34; NC_007286.2 (111182..113287)

Chromosome 34 - NC_007286.2Genomic Context describing neighboring genes Neighboring gene conserved hypothetical protein Neighboring gene conserved hypothetical protein Neighboring gene conserved hypothetical protein Neighboring gene deoxyhypusine synthase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_007286.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the kinetoplastid parasite, Leishmania major. Ivens AC, et al. Science, 2005 Jul 15. PMID 16020728, Free PMC Article
  2. Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania. Rogers MB, et al. Genome Res, 2011 Dec. PMID 22038252, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pseudouridine synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA pseudouridine synthesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tRNA pseudouridine synthesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
conserved hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_007286.2 Reference assembly

    Range
    111182..113287
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001686069.1 → XP_001686121.1  conserved hypothetical protein [Leishmania major strain Friedlin]

    See identical proteins and their annotated locations for XP_001686121.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    Q4Q3H7
    Conserved Domains (2) summary
    cd02568
    Location:60 → 626
    PseudoU_synth_PUS1_PUS2; Pseudouridine synthase, PUS1/ PUS2 like
    PLN03078
    Location:54 → 384
    PLN03078; Putative tRNA pseudouridine synthase; Provisional
Nucleotide Protein
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