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si:dkeyp-67a8.4 si:dkeyp-67a8.4 [ Danio rerio (zebrafish) ]

Gene ID: 565424, updated on 27-Mar-2024

Summary

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Official Symbol
si:dkeyp-67a8.4provided by ZNC
Official Full Name
si:dkeyp-67a8.4provided by ZNC
Primary source
ZFIN:ZDB-GENE-070912-666
See related
Ensembl:ENSDARG00000092823 AllianceGenome:ZFIN:ZDB-GENE-070912-666
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Summary
Predicted to enable GTP binding activity. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human GIMAP4 (GTPase, IMAP family member 4). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
all
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Genomic context

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See si:dkeyp-67a8.4 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
2
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 7 NC_007118.7 (5529762..5537618)
105 previous assembly GRCz10 (GCF_000002035.5) 7 NC_007118.6 (5408320..5415133)

Chromosome 7 - NC_007118.7Genomic Context describing neighboring genes Neighboring gene transfer RNA glutamic acid (anticodon CUC) Neighboring gene myeloid associated differentiation marker a Neighboring gene si:ch211-165f21.6 Neighboring gene ubiquitin carboxyl-terminal hydrolase 37-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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Related articles in PubMed

  1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
  
enables nucleotide binding IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
GTPase IMAP family member 7-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007118.7 Reference GRCz11 Primary Assembly

    Range
    5529762..5537618
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_688704.8 → XP_693796.5  GTPase IMAP family member 7-like

    UniProtKB/TrEMBL
    A0A8N7T809, B0S637
    Related
    ENSDARP00000113487.2, ENSDART00000142709.3
    Conserved Domains (1) summary
    cd01852
    Location:10 → 215
    AIG1; AvrRpt2-Induced Gene 1 (AIG1)
Nucleotide Protein Strain
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