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LMJF_31_2600 putative calreticulin [ Leishmania major strain Friedlin ]

Gene ID: 5654192, updated on 25-Jan-2024

Summary

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Gene symbol
LMJF_31_2600
Gene description
putative calreticulin
Locus tag
LMJF_31_2600
Gene type
protein coding
RNA name
putative calreticulin
RefSeq status
PROVISIONAL
Organism
Leishmania major strain Friedlin (strain: Friedlin)
Lineage
Eukaryota; Euglenozoa; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania
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Genomic context

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Location:
chromosome: 31
Exon count:
1
Sequence:
Chromosome: 31; NC_007272.2 (1264535..1265737, complement)

Chromosome 31 - NC_007272.2Genomic Context describing neighboring genes Neighboring gene ubiquinol-cytochrome-c reductase-like protein Neighboring gene hypothetical protein Neighboring gene RNA polymerase ii largest subunit Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_007272.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the kinetoplastid parasite, Leishmania major. Ivens AC, et al. Science, 2005 Jul 15. PMID 16020728, Free PMC Article
  2. Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania. Rogers MB, et al. Genome Res, 2011 Dec. PMID 22038252, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein folding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
putative calreticulin

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_007272.2 Reference assembly

    Range
    1264535..1265737 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001685195.1 → XP_001685247.1  putative calreticulin [Leishmania major strain Friedlin]

    See identical proteins and their annotated locations for XP_001685247.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    Q4Q601
    Conserved Domains (1) summary
    pfam00262
    Location:27 → 320
    Calreticulin; Calreticulin family
Nucleotide Protein
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