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LMJF_24_0620 putative ubiquitin hydrolase [ Leishmania major strain Friedlin ]

Gene ID: 5652227, updated on 21-Dec-2023

Summary

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Gene symbol
LMJF_24_0620
Gene description
putative ubiquitin hydrolase
Locus tag
LMJF_24_0620
Gene type
protein coding
RNA name
putative ubiquitin hydrolase
RefSeq status
PROVISIONAL
Organism
Leishmania major strain Friedlin (strain: Friedlin)
Lineage
Eukaryota; Euglenozoa; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania
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Genomic context

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Location:
chromosome: 24
Exon count:
1
Sequence:
Chromosome: 24; NC_007265.2 (216854..219283)

Chromosome 24 - NC_007265.2Genomic Context describing neighboring genes Neighboring gene conserved hypothetical protein Neighboring gene putative DNA helicase Neighboring gene putative ATPase subunit 9 Neighboring gene putative MCAK-like kinesin

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_007265.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the kinetoplastid parasite, Leishmania major. Ivens AC, et al. Science, 2005 Jul 15. PMID 16020728, Free PMC Article
  2. Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania. Rogers MB, et al. Genome Res, 2011 Dec. PMID 22038252, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cysteine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
putative ubiquitin hydrolase
XP_001683577.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_007265.2 Reference assembly

    Range
    216854..219283
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001683525.1 → XP_001683577.1  putative ubiquitin hydrolase [Leishmania major strain Friedlin]

    See identical proteins and their annotated locations for XP_001683577.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    Q4QAS1
    Conserved Domains (2) summary
    PRK13875
    Location:515 → 621
    PRK13875; conjugal transfer protein TrbL; Provisional
    cl02553
    Location:120 → 493
    Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...
Nucleotide Protein
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