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LMJF_06_0290 putative ribonuclease H1 [ Leishmania major strain Friedlin ]

Gene ID: 5649049, updated on 21-Dec-2023

Summary

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Gene symbol
LMJF_06_0290
Gene description
putative ribonuclease H1
Locus tag
LMJF_06_0290
Gene type
protein coding
RNA name
putative ribonuclease H1
RefSeq status
PROVISIONAL
Organism
Leishmania major strain Friedlin (strain: Friedlin)
Lineage
Eukaryota; Euglenozoa; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania
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Genomic context

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Location:
chromosome: 6
Exon count:
1
Sequence:
Chromosome: 6; NC_007247.2 (96735..97487, complement)

Chromosome 6 - NC_007247.2Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene MYND finger domain-like protein Neighboring gene putative folate/biopterin transporter

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_007247.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the kinetoplastid parasite, Leishmania major. Ivens AC, et al. Science, 2005 Jul 15. PMID 16020728, Free PMC Article
  2. Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania. Rogers MB, et al. Genome Res, 2011 Dec. PMID 22038252, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA-DNA hybrid ribonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables magnesium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA replication, removal of RNA primer IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
putative ribonuclease H1
XP_001680798.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_007247.2 Reference assembly

    Range
    96735..97487 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001680746.1 → XP_001680798.1  putative ribonuclease H1 [Leishmania major strain Friedlin]

    See identical proteins and their annotated locations for XP_001680798.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    Q4QJ50
    Conserved Domains (1) summary
    cd09280
    Location:32 → 246
    RNase_HI_eukaryote_like; Eukaryotic RNase H is essential and is longer and more complex than their prokaryotic counterparts
Nucleotide Protein
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