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arsg arylsulfatase G [ Danio rerio (zebrafish) ]

Gene ID: 564790, updated on 4-Jan-2025

Summary

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Official Symbol
arsgprovided by ZNC
Official Full Name
arylsulfatase Gprovided by ZNC
Primary source
ZFIN:ZDB-GENE-060503-154
See related
Ensembl:ENSDARG00000101715 AllianceGenome:ZFIN:ZDB-GENE-060503-154
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
si:dkey-220f10.7
Summary
Predicted to enable arylsulfatase activity. Human ortholog(s) of this gene implicated in Usher syndrome. Orthologous to human ARSG (arylsulfatase G). [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
human mouse all
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Genomic context

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See arsg in Genome Data Viewer
Location:
chromosome: 12
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 12 NC_007123.7 (20583449..20618537)
105 previous assembly GRCz10 (GCF_000002035.5) 12 NC_007123.6 (20461678..20478504)

Chromosome 12 - NC_007123.7Genomic Context describing neighboring genes Neighboring gene archaemetzincin-2 Neighboring gene monocarboxylate transporter 7 Neighboring gene sorting nexin 11 Neighboring gene si:dkey-220f10.4 Neighboring gene syntaxin 4 Neighboring gene calcium binding and coiled-coil domain 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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Related articles in PubMed

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
  2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article
  3. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC163043

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables arylsulfatase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
arylsulfatase G
NP_001352290.1
XP_068080714.1
XP_068080715.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001365361.1 → NP_001352290.1  arylsulfatase G precursor

    Status: VALIDATED

    Source sequence(s)
    CR926135, FP885542
    Related
    ENSDARP00000137037.1, ENSDART00000170035.2
    Conserved Domains (1) summary
    cl23718
    Location:34 → 469
    ALP_like; alkaline phosphatases and sulfatases

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007123.7 Reference GRCz11 Primary Assembly

    Range
    20583449..20618537
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_068224614.1 → XP_068080715.1  arylsulfatase G isoform X2

  2. XM_068224613.1 → XP_068080714.1  arylsulfatase G isoform X1

RNA

  1. XR_011017336.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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