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Clip1 CAP-GLY domain containing linker protein 1 [ Mus musculus (house mouse) ]

Gene ID: 56430, updated on 9-Mar-2023

Summary

Official Symbol
Clip1provided by MGI
Official Full Name
CAP-GLY domain containing linker protein 1provided by MGI
Primary source
MGI:MGI:1928401
See related
Ensembl:ENSMUSG00000049550 AllianceGenome:MGI:1928401
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Rsn; CYLN1; Clip50; restin; CLIP170; CLIP-170; mKIAA4046; 1110007I12Rik; 4631429H07Rik
Summary
Enables microtubule plus-end binding activity. Acts upstream of or within protein transport into plasma membrane raft. Located in microtubule plus-end and nuclear envelope. Is expressed in several structures, including brain; early conceptus; heart; and spleen. Orthologous to human CLIP1 (CAP-Gly domain containing linker protein 1). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in cerebellum adult (RPKM 10.9), CNS E18 (RPKM 9.6) and 28 other tissues See more
Orthologs
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Genomic context

See Clip1 in Genome Data Viewer
Location:
5; 5 F
Exon count:
31
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (123715857..123822527, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (123577794..123684606, complement)

Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene diablo, IAP-binding mitochondrial protein Neighboring gene microRNA 7647 Neighboring gene VPS33A CORVET/HOPS core subunit Neighboring gene predicted gene, 24840 Neighboring gene zinc finger, CCHC domain containing 8 Neighboring gene polymerase (RNA) II (DNA directed) polypeptide K pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (2)  1 citation
  • Endonuclease-mediated (4) 

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • KIAA4046

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables identical protein binding ISO
Inferred from Sequence Orthology
more info
 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
enables microtubule binding IDA
Inferred from Direct Assay
more info
PubMed 
enables microtubule binding ISO
Inferred from Sequence Orthology
more info
 
enables microtubule plus-end binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables microtubule plus-end binding IDA
Inferred from Direct Assay
more info
PubMed 
enables microtubule plus-end binding ISO
Inferred from Sequence Orthology
more info
 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables tubulin binding ISO
Inferred from Sequence Orthology
more info
 
enables zinc ion binding ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
is_active_in cell cortex IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in cell projection IEA
Inferred from Electronic Annotation
more info
 
located_in centrosome ISO
Inferred from Sequence Orthology
more info
 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
located_in cytoplasmic microtubule ISO
Inferred from Sequence Orthology
more info
 
located_in cytoplasmic vesicle IEA
Inferred from Electronic Annotation
more info
 
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
 
colocalizes_with macropinosome ISO
Inferred from Sequence Orthology
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
located_in microtubule IDA
Inferred from Direct Assay
more info
PubMed 
located_in microtubule ISO
Inferred from Sequence Orthology
more info
 
located_in microtubule cytoskeleton IDA
Inferred from Direct Assay
more info
PubMed 
located_in microtubule cytoskeleton ISO
Inferred from Sequence Orthology
more info
 
is_active_in microtubule plus-end IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in microtubule plus-end IDA
Inferred from Direct Assay
more info
PubMed 
colocalizes_with microtubule plus-end ISO
Inferred from Sequence Orthology
more info
 
located_in microtubule plus-end ISO
Inferred from Sequence Orthology
more info
 
located_in nuclear envelope IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
CAP-Gly domain-containing linker protein 1
Names
Clip 170
Reed-Steinberg cell-espressed intermediate filament-associated protein
cytoplasmic linker protein 170
cytoplasmic linker protein 50
restin (Reed-Steinberg cell-expressed intermediate filament-associated protein)

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001291229.1NP_001278158.1  CAP-Gly domain-containing linker protein 1 isoform b

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) uses an alternate in-frame splice site in the central coding region, compared to variant 1, resulting in an isoform (b) that is shorter than isoform a.
    Source sequence(s)
    AC129569
    Consensus CDS
    CCDS71663.1
    UniProtKB/Swiss-Prot
    Q922J3
    Related
    ENSMUSP00000107190.2, ENSMUST00000111564.8
    Conserved Domains (3) summary
    pfam01302
    Location:214277
    CAP_GLY; CAP-Gly domain
    pfam15964
    Location:4131070
    CCCAP; Centrosomal colon cancer autoantigen protein family
    pfam16641
    Location:12931309
    CLIP1_ZNF; CLIP1 zinc knuckle
  2. NM_001347468.1NP_001334397.1  CAP-Gly domain-containing linker protein 1 isoform c

    Status: VALIDATED

    Description
    Transcript Variant: This variant (3) has several in-frame differences compared to variant 1. The resulting isoform (c) has the same N- and C-termini but is shorter compared to isoform a.
    Source sequence(s)
    AC129569
    Consensus CDS
    CCDS84958.1
    UniProtKB/TrEMBL
    D3Z3M7
    Related
    ENSMUSP00000068241.6, ENSMUST00000063905.12
  3. NM_001359220.1NP_001346149.1  CAP-Gly domain-containing linker protein 1 isoform d

    Status: VALIDATED

    Source sequence(s)
    AC129569
    Conserved Domains (3) summary
    pfam01302
    Location:213277
    CAP_GLY; CAP-Gly domain
    pfam16641
    Location:13671383
    CLIP1_ZNF; CLIP1 zinc knuckle
    cl25732
    Location:4041298
    SMC_N; RecF/RecN/SMC N terminal domain
  4. NM_001359221.1NP_001346150.1  CAP-Gly domain-containing linker protein 1 isoform e

    Status: VALIDATED

    Source sequence(s)
    AC129569
    Related
    ENSMUSP00000121425.2, ENSMUST00000137363.8
    Conserved Domains (3) summary
    pfam01302
    Location:213277
    CAP_GLY; CAP-Gly domain
    pfam16641
    Location:12911307
    CLIP1_ZNF; CLIP1 zinc knuckle
    cl25732
    Location:4041222
    SMC_N; RecF/RecN/SMC N terminal domain
  5. NM_001359222.1NP_001346151.1  CAP-Gly domain-containing linker protein 1 isoform f

    Status: VALIDATED

    Source sequence(s)
    AC129569
    Conserved Domains (3) summary
    pfam01302
    Location:213277
    CAP_GLY; CAP-Gly domain
    pfam16641
    Location:12561272
    CLIP1_ZNF; CLIP1 zinc knuckle
    cl25732
    Location:4041187
    SMC_N; RecF/RecN/SMC N terminal domain
  6. NM_001359223.1NP_001346152.1  CAP-Gly domain-containing linker protein 1 isoform g

    Status: VALIDATED

    Source sequence(s)
    AC129569
    Conserved Domains (2) summary
    pfam01302
    Location:213277
    CAP_GLY; CAP-Gly domain
    cl25732
    Location:3511093
    SMC_N; RecF/RecN/SMC N terminal domain
  7. NM_001359224.1NP_001346153.1  CAP-Gly domain-containing linker protein 1 isoform h

    Status: VALIDATED

    Source sequence(s)
    AC129569
    Conserved Domains (2) summary
    pfam01302
    Location:213277
    CAP_GLY; CAP-Gly domain
    cl25732
    Location:3691134
    SMC_N; RecF/RecN/SMC N terminal domain
  8. NM_019765.5NP_062739.2  CAP-Gly domain-containing linker protein 1 isoform a

    See identical proteins and their annotated locations for NP_062739.2

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (a).
    Source sequence(s)
    AC129569
    Consensus CDS
    CCDS19667.1
    UniProtKB/Swiss-Prot
    Q571L7, Q922J3
    Related
    ENSMUSP00000107192.3, ENSMUST00000111566.9
    Conserved Domains (3) summary
    pfam05483
    Location:3441112
    SCP-1; Synaptonemal complex protein 1 (SCP-1)
    pfam01302
    Location:214277
    CAP_GLY; CAP-Gly domain
    pfam16641
    Location:13691385
    CLIP1_ZNF; CLIP1 zinc knuckle

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000071.7 Reference GRCm39 C57BL/6J

    Range
    123715857..123822527 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030254713.2XP_030110573.1  CAP-Gly domain-containing linker protein 1 isoform X10

    Conserved Domains (4) summary
    COG1196
    Location:6491473
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    PRK03918
    Location:338857
    PRK03918; DNA double-strand break repair ATPase Rad50
    pfam01302
    Location:213277
    CAP_GLY; CAP-Gly domain
    pfam16641
    Location:21032119
    CLIP1_ZNF; CLIP1 zinc knuckle
  2. XM_006530416.5XP_006530479.1  CAP-Gly domain-containing linker protein 1 isoform X8

    Conserved Domains (4) summary
    COG1196
    Location:6601484
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    TIGR02168
    Location:338927
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam01302
    Location:213277
    CAP_GLY; CAP-Gly domain
    pfam16641
    Location:21142130
    CLIP1_ZNF; CLIP1 zinc knuckle
  3. XM_036165355.1XP_036021248.1  CAP-Gly domain-containing linker protein 1 isoform X38

    Conserved Domains (3) summary
    COG1196
    Location:4041187
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam01302
    Location:213277
    CAP_GLY; CAP-Gly domain
    pfam16641
    Location:12541270
    CLIP1_ZNF; CLIP1 zinc knuckle
  4. XM_017321029.3XP_017176518.1  CAP-Gly domain-containing linker protein 1 isoform X37

    Conserved Domains (3) summary
    COG1196
    Location:3691194
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam01302
    Location:213277
    CAP_GLY; CAP-Gly domain
    pfam16641
    Location:12631279
    CLIP1_ZNF; CLIP1 zinc knuckle
  5. XM_036165352.1XP_036021245.1  CAP-Gly domain-containing linker protein 1 isoform X34

    Conserved Domains (3) summary
    COG1196
    Location:4201226
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam01302
    Location:213277
    CAP_GLY; CAP-Gly domain
    pfam16641
    Location:12951311
    CLIP1_ZNF; CLIP1 zinc knuckle
  6. XM_006530423.5XP_006530486.1  CAP-Gly domain-containing linker protein 1 isoform X32

    Conserved Domains (3) summary
    COG1196
    Location:4201233
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam01302
    Location:213277
    CAP_GLY; CAP-Gly domain
    pfam16641
    Location:13021318
    CLIP1_ZNF; CLIP1 zinc knuckle
  7. XM_006530419.5XP_006530482.1  CAP-Gly domain-containing linker protein 1 isoform X12

    Conserved Domains (5) summary
    COG1196
    Location:4201223
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    COG5022
    Location:16402016
    COG5022; Myosin heavy chain [General function prediction only]
    TIGR02168
    Location:9001797
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam01302
    Location:213277
    CAP_GLY; CAP-Gly domain
    pfam16641
    Location:20582074
    CLIP1_ZNF; CLIP1 zinc knuckle
  8. XM_030254716.2XP_030110576.1  CAP-Gly domain-containing linker protein 1 isoform X23

    Conserved Domains (3) summary
    COG1196
    Location:4201309
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam01302
    Location:213277
    CAP_GLY; CAP-Gly domain
    pfam16641
    Location:13781394
    CLIP1_ZNF; CLIP1 zinc knuckle
  9. XM_006530415.5XP_006530478.1  CAP-Gly domain-containing linker protein 1 isoform X7

    Conserved Domains (4) summary
    COG1196
    Location:6801504
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    TIGR02168
    Location:352947
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam01302
    Location:213277
    CAP_GLY; CAP-Gly domain
    pfam16641
    Location:21342150
    CLIP1_ZNF; CLIP1 zinc knuckle
  10. XM_036165353.1XP_036021246.1  CAP-Gly domain-containing linker protein 1 isoform X35

    Conserved Domains (3) summary
    COG1196
    Location:4041222
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam01302
    Location:213277
    CAP_GLY; CAP-Gly domain
    pfam16641
    Location:12891305
    CLIP1_ZNF; CLIP1 zinc knuckle
  11. XM_017321020.3XP_017176509.1  CAP-Gly domain-containing linker protein 1 isoform X13

    Conserved Domains (5) summary
    COG1196
    Location:3511078
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    COG5022
    Location:16362012
    COG5022; Myosin heavy chain [General function prediction only]
    TIGR02168
    Location:8961793
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam01302
    Location:213277
    CAP_GLY; CAP-Gly domain
    pfam16641
    Location:20542070
    CLIP1_ZNF; CLIP1 zinc knuckle
  12. XM_036165346.1XP_036021239.1  CAP-Gly domain-containing linker protein 1 isoform X27

    Conserved Domains (3) summary
    COG1196
    Location:3511076
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam01302
    Location:213277
    CAP_GLY; CAP-Gly domain
    pfam16641
    Location:13281344
    CLIP1_ZNF; CLIP1 zinc knuckle
  13. XM_036165344.1XP_036021237.1  CAP-Gly domain-containing linker protein 1 isoform X26

    Conserved Domains (4) summary
    COG1196
    Location:4621261
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam17380
    Location:356525
    DUF5401; Family of unknown function (DUF5401)
    pfam01302
    Location:213277
    CAP_GLY; CAP-Gly domain
    pfam16641
    Location:13301346
    CLIP1_ZNF; CLIP1 zinc knuckle
  14. XM_006530422.5XP_006530485.1  CAP-Gly domain-containing linker protein 1 isoform X20

    UniProtKB/TrEMBL
    D3Z2Z1
    Related
    ENSMUSP00000107186.2, ENSMUST00000111561.8
    Conserved Domains (3) summary
    COG1196
    Location:3511152
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam01302
    Location:213277
    CAP_GLY; CAP-Gly domain
    pfam16641
    Location:14041420
    CLIP1_ZNF; CLIP1 zinc knuckle
  15. XM_036165337.1XP_036021230.1  CAP-Gly domain-containing linker protein 1 isoform X19

    Conserved Domains (4) summary
    COG1196
    Location:4621337
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam17380
    Location:356525
    DUF5401; Family of unknown function (DUF5401)
    pfam01302
    Location:213277
    CAP_GLY; CAP-Gly domain
    pfam16641
    Location:14061422
    CLIP1_ZNF; CLIP1 zinc knuckle
  16. XM_036165336.1XP_036021229.1  CAP-Gly domain-containing linker protein 1 isoform X18

    Conserved Domains (4) summary
    COG1196
    Location:3511152
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam01302
    Location:213277
    CAP_GLY; CAP-Gly domain
    pfam16641
    Location:14131429
    CLIP1_ZNF; CLIP1 zinc knuckle
    NF033930
    Location:10581338
    pneumo_PspA; pneumococcal surface protein A
  17. XM_006530412.5XP_006530475.1  CAP-Gly domain-containing linker protein 1 isoform X5

    Conserved Domains (4) summary
    COG1196
    Location:7151539
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    TIGR02168
    Location:351982
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam01302
    Location:213277
    CAP_GLY; CAP-Gly domain
    pfam16641
    Location:21692185
    CLIP1_ZNF; CLIP1 zinc knuckle
  18. XM_036165354.1XP_036021247.1  CAP-Gly domain-containing linker protein 1 isoform X36

    Conserved Domains (3) summary
    COG1196
    Location:4041198
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam01302
    Location:213277
    CAP_GLY; CAP-Gly domain
    pfam16641
    Location:12651281
    CLIP1_ZNF; CLIP1 zinc knuckle
  19. XM_036165348.1XP_036021241.1  CAP-Gly domain-containing linker protein 1 isoform X30

    Conserved Domains (4) summary
    COG1196
    Location:4771237
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam01302
    Location:213277
    CAP_GLY; CAP-Gly domain
    pfam16641
    Location:13041320
    CLIP1_ZNF; CLIP1 zinc knuckle
    NF033930
    Location:336603
    pneumo_PspA; pneumococcal surface protein A
  20. XM_036165347.1XP_036021240.1  CAP-Gly domain-containing linker protein 1 isoform X29

    Conserved Domains (4) summary
    COG1196
    Location:4771237
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam01302
    Location:213277
    CAP_GLY; CAP-Gly domain
    pfam16641
    Location:13061322
    CLIP1_ZNF; CLIP1 zinc knuckle
    NF033930
    Location:336603
    pneumo_PspA; pneumococcal surface protein A
  21. XM_036165339.1XP_036021232.1  CAP-Gly domain-containing linker protein 1 isoform X22

    Conserved Domains (4) summary
    COG1196
    Location:4771313
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam01302
    Location:213277
    CAP_GLY; CAP-Gly domain
    pfam16641
    Location:13801396
    CLIP1_ZNF; CLIP1 zinc knuckle
    NF033930
    Location:349603
    pneumo_PspA; pneumococcal surface protein A
  22. XM_036165338.1XP_036021231.1  CAP-Gly domain-containing linker protein 1 isoform X21

    Conserved Domains (4) summary
    COG1196
    Location:4771313
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam01302
    Location:213277
    CAP_GLY; CAP-Gly domain
    pfam16641
    Location:13821398
    CLIP1_ZNF; CLIP1 zinc knuckle
    NF033930
    Location:349603
    pneumo_PspA; pneumococcal surface protein A
  23. XM_006530413.5XP_006530476.1  CAP-Gly domain-containing linker protein 1 isoform X6

    Conserved Domains (4) summary
    COG1196
    Location:6911515
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    TIGR02168
    Location:352958
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam01302
    Location:213277
    CAP_GLY; CAP-Gly domain
    pfam16641
    Location:21452161
    CLIP1_ZNF; CLIP1 zinc knuckle
  24. XM_036165351.1XP_036021244.1  CAP-Gly domain-containing linker protein 1 isoform X33

    Conserved Domains (3) summary
    COG1196
    Location:4201233
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam01302
    Location:213277
    CAP_GLY; CAP-Gly domain
    pfam16641
    Location:13001316
    CLIP1_ZNF; CLIP1 zinc knuckle
  25. XM_036165350.1XP_036021243.1  CAP-Gly domain-containing linker protein 1 isoform X31

    Conserved Domains (3) summary
    COG1196
    Location:4201233
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam01302
    Location:213277
    CAP_GLY; CAP-Gly domain
    pfam16641
    Location:13021318
    CLIP1_ZNF; CLIP1 zinc knuckle
  26. XM_017321026.3XP_017176515.1  CAP-Gly domain-containing linker protein 1 isoform X28

    Conserved Domains (3) summary
    COG1196
    Location:4041240
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam01302
    Location:213277
    CAP_GLY; CAP-Gly domain
    pfam16641
    Location:13091325
    CLIP1_ZNF; CLIP1 zinc knuckle
  27. XM_006530418.5XP_006530481.1  CAP-Gly domain-containing linker protein 1 isoform X11

    Conserved Domains (5) summary
    COG1196
    Location:3511089
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    COG5022
    Location:16472023
    COG5022; Myosin heavy chain [General function prediction only]
    TIGR02168
    Location:9071804
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam01302
    Location:213277
    CAP_GLY; CAP-Gly domain
    pfam16641
    Location:20652081
    CLIP1_ZNF; CLIP1 zinc knuckle
  28. XM_036165342.1XP_036021235.1  CAP-Gly domain-containing linker protein 1 isoform X25

    Conserved Domains (4) summary
    COG1196
    Location:4731272
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam17380
    Location:356536
    DUF5401; Family of unknown function (DUF5401)
    pfam01302
    Location:213277
    CAP_GLY; CAP-Gly domain
    pfam16641
    Location:13391355
    CLIP1_ZNF; CLIP1 zinc knuckle
  29. XM_036165341.1XP_036021234.1  CAP-Gly domain-containing linker protein 1 isoform X24

    Conserved Domains (4) summary
    COG1196
    Location:4731272
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam17380
    Location:356536
    DUF5401; Family of unknown function (DUF5401)
    pfam01302
    Location:213277
    CAP_GLY; CAP-Gly domain
    pfam16641
    Location:13411357
    CLIP1_ZNF; CLIP1 zinc knuckle
  30. XM_006530417.5XP_006530480.1  CAP-Gly domain-containing linker protein 1 isoform X9

    Conserved Domains (6) summary
    COG1196
    Location:4731269
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    COG5022
    Location:16862062
    COG5022; Myosin heavy chain [General function prediction only]
    TIGR02168
    Location:9461843
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam01302
    Location:213277
    CAP_GLY; CAP-Gly domain
    pfam16641
    Location:21042120
    CLIP1_ZNF; CLIP1 zinc knuckle
    pfam17380
    Location:343533
    DUF5401; Family of unknown function (DUF5401)
  31. XM_006530421.5XP_006530484.1  CAP-Gly domain-containing linker protein 1 isoform X17

    UniProtKB/TrEMBL
    F8WIA1
    Related
    ENSMUSP00000031382.8, ENSMUST00000031382.14
    Conserved Domains (4) summary
    COG1196
    Location:4731348
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam17380
    Location:356536
    DUF5401; Family of unknown function (DUF5401)
    pfam01302
    Location:213277
    CAP_GLY; CAP-Gly domain
    pfam16641
    Location:14151431
    CLIP1_ZNF; CLIP1 zinc knuckle
  32. XM_017321022.3XP_017176511.1  CAP-Gly domain-containing linker protein 1 isoform X16

    Conserved Domains (4) summary
    COG1196
    Location:4731348
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam01302
    Location:213277
    CAP_GLY; CAP-Gly domain
    pfam16641
    Location:14171433
    CLIP1_ZNF; CLIP1 zinc knuckle
    pfam17380
    Location:343533
    DUF5401; Family of unknown function (DUF5401)
  33. XM_036165334.1XP_036021227.1  CAP-Gly domain-containing linker protein 1 isoform X15

    Conserved Domains (4) summary
    COG1196
    Location:4731355
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam17380
    Location:356536
    DUF5401; Family of unknown function (DUF5401)
    pfam01302
    Location:213277
    CAP_GLY; CAP-Gly domain
    pfam16641
    Location:14221438
    CLIP1_ZNF; CLIP1 zinc knuckle
  34. XM_006530420.5XP_006530483.1  CAP-Gly domain-containing linker protein 1 isoform X14

    Conserved Domains (4) summary
    COG1196
    Location:4731355
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam01302
    Location:213277
    CAP_GLY; CAP-Gly domain
    pfam16641
    Location:14241440
    CLIP1_ZNF; CLIP1 zinc knuckle
    pfam17380
    Location:343533
    DUF5401; Family of unknown function (DUF5401)
  35. XM_006530411.5XP_006530474.1  CAP-Gly domain-containing linker protein 1 isoform X4

    Conserved Domains (4) summary
    COG1196
    Location:7261550
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    TIGR02168
    Location:11412095
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam01302
    Location:213277
    CAP_GLY; CAP-Gly domain
    pfam16641
    Location:21712187
    CLIP1_ZNF; CLIP1 zinc knuckle
  36. XM_006530410.5XP_006530473.1  CAP-Gly domain-containing linker protein 1 isoform X3

    Conserved Domains (5) summary
    COG1196
    Location:7261550
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    TIGR02168
    Location:351993
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam01302
    Location:213277
    CAP_GLY; CAP-Gly domain
    pfam09787
    Location:19112129
    Golgin_A5; Golgin subfamily A member 5
    pfam16641
    Location:21732189
    CLIP1_ZNF; CLIP1 zinc knuckle
  37. XM_006530409.5XP_006530472.1  CAP-Gly domain-containing linker protein 1 isoform X2

    Conserved Domains (4) summary
    COG1196
    Location:7261550
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    TIGR02168
    Location:351993
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam01302
    Location:213277
    CAP_GLY; CAP-Gly domain
    pfam16641
    Location:21782194
    CLIP1_ZNF; CLIP1 zinc knuckle
  38. XM_006530407.5XP_006530470.1  CAP-Gly domain-containing linker protein 1 isoform X1

    See identical proteins and their annotated locations for XP_006530470.1

    Conserved Domains (4) summary
    COG1196
    Location:7261550
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    TIGR02168
    Location:351993
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam01302
    Location:213277
    CAP_GLY; CAP-Gly domain
    pfam16641
    Location:21802196
    CLIP1_ZNF; CLIP1 zinc knuckle
  39. XM_030254714.1XP_030110574.1  CAP-Gly domain-containing linker protein 1 isoform X12

    Conserved Domains (5) summary
    COG1196
    Location:4201223
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    COG5022
    Location:16402016
    COG5022; Myosin heavy chain [General function prediction only]
    TIGR02168
    Location:9001797
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam01302
    Location:213277
    CAP_GLY; CAP-Gly domain
    pfam16641
    Location:20582074
    CLIP1_ZNF; CLIP1 zinc knuckle
  40. XM_030254712.1XP_030110572.1  CAP-Gly domain-containing linker protein 1 isoform X7

    Conserved Domains (4) summary
    COG1196
    Location:6801504
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    TIGR02168
    Location:352947
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam01302
    Location:213277
    CAP_GLY; CAP-Gly domain
    pfam16641
    Location:21342150
    CLIP1_ZNF; CLIP1 zinc knuckle
  41. XM_011248233.3XP_011246535.1  CAP-Gly domain-containing linker protein 1 isoform X1

    See identical proteins and their annotated locations for XP_011246535.1

    Conserved Domains (4) summary
    COG1196
    Location:7261550
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    TIGR02168
    Location:351993
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam01302
    Location:213277
    CAP_GLY; CAP-Gly domain
    pfam16641
    Location:21802196
    CLIP1_ZNF; CLIP1 zinc knuckle
  42. XM_036165349.1XP_036021242.1  CAP-Gly domain-containing linker protein 1 isoform X30

    Conserved Domains (4) summary
    COG1196
    Location:4771237
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam01302
    Location:213277
    CAP_GLY; CAP-Gly domain
    pfam16641
    Location:13041320
    CLIP1_ZNF; CLIP1 zinc knuckle
    NF033930
    Location:336603
    pneumo_PspA; pneumococcal surface protein A
  43. XM_036165343.1XP_036021236.1  CAP-Gly domain-containing linker protein 1 isoform X25

    Conserved Domains (4) summary
    COG1196
    Location:4731272
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam17380
    Location:356536
    DUF5401; Family of unknown function (DUF5401)
    pfam01302
    Location:213277
    CAP_GLY; CAP-Gly domain
    pfam16641
    Location:13391355
    CLIP1_ZNF; CLIP1 zinc knuckle
  44. XM_036165335.1XP_036021228.1  CAP-Gly domain-containing linker protein 1 isoform X17

    UniProtKB/TrEMBL
    F8WIA1
    Conserved Domains (4) summary
    COG1196
    Location:4731348
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam17380
    Location:356536
    DUF5401; Family of unknown function (DUF5401)
    pfam01302
    Location:213277
    CAP_GLY; CAP-Gly domain
    pfam16641
    Location:14151431
    CLIP1_ZNF; CLIP1 zinc knuckle
  45. XM_036165340.1XP_036021233.1  CAP-Gly domain-containing linker protein 1 isoform X22

    Conserved Domains (4) summary
    COG1196
    Location:4771313
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam01302
    Location:213277
    CAP_GLY; CAP-Gly domain
    pfam16641
    Location:13801396
    CLIP1_ZNF; CLIP1 zinc knuckle
    NF033930
    Location:349603
    pneumo_PspA; pneumococcal surface protein A