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Dpt dermatopontin [ Mus musculus (house mouse) ]

Gene ID: 56429, updated on 23-May-2018
Official Symbol
Dptprovided by MGI
Official Full Name
dermatopontinprovided by MGI
Primary source
MGI:MGI:1928392
See related
Ensembl:ENSMUSG00000026574 Vega:OTTMUSG00000049869
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Eq1; EQ-1; 1810032B19Rik; 5033416F05Rik
Expression
Biased expression in subcutaneous fat pad adult (RPKM 128.3), mammary gland adult (RPKM 87.4) and 12 other tissues See more
Orthologs
See Dpt in Genome Data Viewer
Location:
1; 1 H2.2
Exon count:
4
Annotation release Status Assembly Chr Location
106 current GRCm38.p4 (GCF_000001635.24) 1 NC_000067.6 (164796732..164824266)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 1 NC_000067.5 (166726863..166754397)

Chromosome 1 - NC_000067.6Genomic Context describing neighboring genes Neighboring gene predicted gene, 39691 Neighboring gene predicted gene, 26685 Neighboring gene predicted gene, 32569 Neighboring gene predicted gene, 32652 Neighboring gene predicted gene, 20743 Neighboring gene chemokine (C motif) ligand 1

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
cell adhesion IEA
Inferred from Electronic Annotation
more info
 
collagen fibril organization IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
collagen fibril organization IMP
Inferred from Mutant Phenotype
more info
PubMed 
negative regulation of cell proliferation IDA
Inferred from Direct Assay
more info
PubMed 
Component Evidence Code Pubs
extracellular matrix IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
extracellular region IEA
Inferred from Electronic Annotation
more info
 
extracellular space HDA PubMed 
Preferred Names
dermatopontin
Names
TRAMP
early quiescence protein-1
tyrosine-rich acidic matrix protein

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_019759.3NP_062733.1  dermatopontin precursor

    See identical proteins and their annotated locations for NP_062733.1

    Status: VALIDATED

    Source sequence(s)
    AC137884
    Consensus CDS
    CCDS15437.1
    UniProtKB/Swiss-Prot
    Q9QZZ6
    Related
    ENSMUSP00000027861.4, OTTMUSP00000068621, ENSMUST00000027861.5
    Conserved Domains (1) summary
    pfam14704
    Location:43192
    DERM; Dermatopontin

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p4 C57BL/6J

Genomic

  1. NC_000067.6 Reference GRCm38.p4 C57BL/6J

    Range
    164796732..164824266
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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