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si:dkey-281i8.1 si:dkey-281i8.1 [ Danio rerio (zebrafish) ]

Gene ID: 562856, updated on 10-Oct-2019

Summary

Official Symbol
si:dkey-281i8.1provided by ZNC
Official Full Name
si:dkey-281i8.1provided by ZNC
Primary source
ZFIN:ZDB-GENE-060503-70
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio
Also known as
si:dkey-281i8.
Annotation information
not in current annotation release

Genomic context

See si:dkey-281i8.1 in Genome Data Viewer
Location:
chromosome: 9
Annotation release Status Assembly Chr Location
105 latest, but not current GRCz10 (GCF_000002035.5) 9 NC_007120.6 (19584659..19592002)
103 previous assembly Zv9 (GCF_000002035.4) 9 NC_007120.5 (20209937..20233335)

General gene information

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
cell adhesion molecule binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
protein homodimerization activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
signaling receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Process Evidence Code Pubs
heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
homophilic cell adhesion via plasma membrane adhesion molecules IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
cell-cell adherens junction IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
membrane IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001115052.2NP_001108524.1  si:dkey-281i8.1

    See identical proteins and their annotated locations for NP_001108524.1

    Status: PROVISIONAL

    Source sequence(s)
    CU638784
    UniProtKB/TrEMBL
    B0CLY8
    Conserved Domains (2) summary
    smart00410
    Location:267332
    IG_like; Immunoglobulin like
    cl11960
    Location:151248
    Ig; Immunoglobulin domain
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