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Actr8 ARP8 actin-related protein 8 [ Mus musculus (house mouse) ]

Gene ID: 56249, updated on 22-Oct-2019

Summary

Official Symbol
Actr8provided by MGI
Official Full Name
ARP8 actin-related protein 8provided by MGI
Primary source
MGI:MGI:1860775
See related
Ensembl:ENSMUSG00000015971
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
ARP8; 5730542K05Rik
Expression
Ubiquitous expression in CNS E11.5 (RPKM 11.1), CNS E14 (RPKM 10.1) and 28 other tissues See more
Orthologs

Genomic context

See Actr8 in Genome Data Viewer
Location:
14; 14 B
Exon count:
14
Annotation release Status Assembly Chr Location
108 current GRCm38.p6 (GCF_000001635.26) 14 NC_000080.6 (29978337..29995452)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 14 NC_000080.5 (30791523..30806407)

Chromosome 14 - NC_000080.6Genomic Context describing neighboring genes Neighboring gene ribosomal protein S7 pseudogene Neighboring gene selenoprotein K Neighboring gene microRNA 6947 Neighboring gene interleukin 17 receptor B Neighboring gene choline dehydrogenase Neighboring gene predicted gene, 35449

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (1) 

Pathways from BioSystems

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
ATP binding IEA
Inferred from Electronic Annotation
more info
 
nucleotide binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
ATP-dependent chromatin remodeling IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
DNA recombination IEA
Inferred from Electronic Annotation
more info
 
DNA repair IEA
Inferred from Electronic Annotation
more info
 
cell cycle IEA
Inferred from Electronic Annotation
more info
 
cell division IEA
Inferred from Electronic Annotation
more info
 
cellular response to DNA damage stimulus IEA
Inferred from Electronic Annotation
more info
 
chromatin remodeling IEA
Inferred from Electronic Annotation
more info
 
double-strand break repair IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
regulation of transcription, DNA-templated IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
Ino80 complex IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Ino80 complex ISO
Inferred from Sequence Orthology
more info
 
centrosome ISO
Inferred from Sequence Orthology
more info
 
chromosome IEA
Inferred from Electronic Annotation
more info
 
nucleoplasm ISO
Inferred from Sequence Orthology
more info
 
nucleus ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
actin-related protein 8
Names
ARP8 actin-related protein 8 homolog
actin-related protein 8 homolog

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_027493.3NP_081769.2  actin-related protein 8

    See identical proteins and their annotated locations for NP_081769.2

    Status: VALIDATED

    Source sequence(s)
    CT009536
    Consensus CDS
    CCDS26891.1
    UniProtKB/Swiss-Prot
    Q8R2S9
    Related
    ENSMUSP00000016115.4, ENSMUST00000016115.5
    Conserved Domains (1) summary
    cl17037
    Location:167618
    NBD_sugar-kinase_HSP70_actin; Nucleotide-Binding Domain of the sugar kinase/HSP70/actin superfamily

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 108 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p6 C57BL/6J

Genomic

  1. NC_000080.6 Reference GRCm38.p6 C57BL/6J

    Range
    29978337..29995452
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030247897.1XP_030103757.1  actin-related protein 8 isoform X2

  2. XM_006519309.4XP_006519372.2  actin-related protein 8 isoform X1

    Conserved Domains (1) summary
    cl17037
    Location:167576
    NBD_sugar-kinase_HSP70_actin; Nucleotide-Binding Domain of the sugar kinase/HSP70/actin superfamily
  3. XM_030247898.1XP_030103758.1  actin-related protein 8 isoform X3

  4. XM_030247899.1XP_030103759.1  actin-related protein 8 isoform X4

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