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Nagk N-acetylglucosamine kinase [ Mus musculus (house mouse) ]

Gene ID: 56174, updated on 25-Sep-2017
Official Symbol
Nagkprovided by MGI
Official Full Name
N-acetylglucosamine kinaseprovided by MGI
Primary source
MGI:MGI:1860418
See related
Ensembl:ENSMUSG00000034744 Vega:OTTMUSG00000023757
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gnk
Expression
Ubiquitous expression in testis adult (RPKM 14.3), placenta adult (RPKM 11.0) and 28 other tissues See more
Orthologs
Location:
6; 6 C3
Exon count:
11
Annotation release Status Assembly Chr Location
106 current GRCm38.p4 (GCF_000001635.24) 6 NC_000072.6 (83795005..83802556)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 6 NC_000072.5 (83745051..83752550)

Chromosome 6 - NC_000072.6Genomic Context describing neighboring genes Neighboring gene testis expressed gene 261 Neighboring gene ribosomal protein L27 pseudogene Neighboring gene poly(A) binding protein interacting protein 2B Neighboring gene ribosomal protein L18 pseudogene

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Gene trapped (1) 
  • Targeted (2) 

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
ATP binding IEA
Inferred from Electronic Annotation
more info
 
N-acetylglucosamine kinase activity IDA
Inferred from Direct Assay
more info
PubMed 
N-acetylglucosamine kinase activity ISO
Inferred from Sequence Orthology
more info
 
N-acylmannosamine kinase activity IDA
Inferred from Direct Assay
more info
PubMed 
kinase activity IEA
Inferred from Electronic Annotation
more info
 
nucleotide binding IEA
Inferred from Electronic Annotation
more info
 
transferase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
N-acetylglucosamine metabolic process IDA
Inferred from Direct Assay
more info
PubMed 
N-acetylneuraminate catabolic process TAS
Traceable Author Statement
more info
PubMed 
phosphorylation IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
extracellular exosome ISO
Inferred from Sequence Orthology
more info
 
Preferred Names
N-acetyl-D-glucosamine kinase
Names
GlcNAc kinase
NP_001157659.1
NP_062415.1
XP_006506470.1
XP_006506471.1
XP_006506472.1
XP_006506473.1
XP_017177174.1
XP_017177175.1

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001164187.1NP_001157659.1  N-acetyl-D-glucosamine kinase isoform 2

    See identical proteins and their annotated locations for NP_001157659.1

    Status: VALIDATED

    Source sequence(s)
    AC090647, AC156283
    Conserved Domains (1) summary
    cl17037
    Location:2228
    NBD_sugar-kinase_HSP70_actin; Nucleotide-Binding Domain of the sugar kinase/HSP70/actin superfamily
  2. NM_001347315.1NP_001334244.1  N-acetyl-D-glucosamine kinase isoform 3

    Status: VALIDATED

    Source sequence(s)
    AI844239, AK007240, BY334673
    Consensus CDS
    CCDS85072.1
    UniProtKB/TrEMBL
    Q9D997
  3. NM_019542.2NP_062415.1  N-acetyl-D-glucosamine kinase isoform 1

    See identical proteins and their annotated locations for NP_062415.1

    Status: VALIDATED

    Source sequence(s)
    AC090647, AC156283
    Consensus CDS
    CCDS20286.1
    UniProtKB/Swiss-Prot
    Q9QZ08
    UniProtKB/TrEMBL
    Q3U2G9
    Related
    ENSMUSP00000042026.7, OTTMUSP00000028070, ENSMUST00000037376.13, OTTMUST00000058043
    Conserved Domains (1) summary
    cl17037
    Location:1279
    NBD_sugar-kinase_HSP70_actin; Nucleotide-Binding Domain of the sugar kinase/HSP70/actin superfamily

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p4 C57BL/6J

Genomic

  1. NC_000072.6 Reference GRCm38.p4 C57BL/6J

    Range
    83795005..83802556
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017321685.1XP_017177174.1  N-acetyl-D-glucosamine kinase isoform X3

    Conserved Domains (1) summary
    cl17037
    Location:34193
    NBD_sugar-kinase_HSP70_actin; Nucleotide-Binding Domain of the sugar kinase/HSP70/actin superfamily
  2. XM_006506407.3XP_006506470.1  N-acetyl-D-glucosamine kinase isoform X1

    Related
    ENSMUSP00000109482.1, OTTMUSP00000028071, ENSMUST00000113851.7, OTTMUST00000058044
    Conserved Domains (1) summary
    cl17037
    Location:29297
    NBD_sugar-kinase_HSP70_actin; Nucleotide-Binding Domain of the sugar kinase/HSP70/actin superfamily
  3. XM_017321686.1XP_017177175.1  N-acetyl-D-glucosamine kinase isoform X4

  4. XM_006506409.2XP_006506472.1  N-acetyl-D-glucosamine kinase isoform X3

    See identical proteins and their annotated locations for XP_006506472.1

    Conserved Domains (1) summary
    cl17037
    Location:34193
    NBD_sugar-kinase_HSP70_actin; Nucleotide-Binding Domain of the sugar kinase/HSP70/actin superfamily
  5. XM_006506410.1XP_006506473.1  N-acetyl-D-glucosamine kinase isoform X3

    See identical proteins and their annotated locations for XP_006506473.1

    Conserved Domains (1) summary
    cl17037
    Location:34193
    NBD_sugar-kinase_HSP70_actin; Nucleotide-Binding Domain of the sugar kinase/HSP70/actin superfamily
  6. XM_006506408.2XP_006506471.1  N-acetyl-D-glucosamine kinase isoform X2

    Conserved Domains (1) summary
    cl17037
    Location:7249
    NBD_sugar-kinase_HSP70_actin; Nucleotide-Binding Domain of the sugar kinase/HSP70/actin superfamily
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