U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

insL IS2 transposase subunit; similar to NP_839581; identified by match to protein family HMM PF01527 [ Escherichia coli APEC O1 ]

Gene ID: 5616634, discontinued on 29-Jan-2015
  • All Gene records for this genome have been discontinued due to a change in scope for prokaryotic genomes in Gene. At the time this Gene record was discontinued, the RefSeq genome was re-annotated with the following features at this location:
Gene symbol
insL
Gene description
IS2 transposase subunit; similar to NP_839581; identified by match to protein family HMM PF01527
Locus tag
APECO1_O1CoBM126
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Escherichia coli APEC O1 (strain: APEC O1, subtype: ExPEC, serovar: O1:K1, subgroup: APEC)
Lineage
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia
Old locus tag
O1_ColBM_126
Try the new Gene page
Try the new Transcripts and proteins table
Location:
plasmid: pAPEC-O1-ColBM
Sequence:
NC_009837.1 (107550..107960, complement)
Genomic Sequence:
NC_009837.1

Go to nucleotide: Graphics FASTA GenBank

GeneRIFs: Gene References Into Functions

Preferred Names
IS2 transposase subunit; similar to NP_839581; identified by match to protein family HMM PF01527
Names
insertion sequence 2 OrfA protein
YP_001481281.1
  • IS2 OrfA; forms an overlapping reading frame with orfB; may form a fusion protein OrfAB due to ribosomal frameshifting; both OrfA and OrfAB bind terminal inverted repeats

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_009837.1 Reference assembly

    Range
    107550..107960 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_001481281.1 insertion sequence 2 OrfA protein [Escherichia coli APEC O1]

    Status: REVIEWED

Nucleotide Protein
Heading Accession and Version