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TEX13B testis expressed 13B [ Homo sapiens (human) ]

Gene ID: 56156, updated on 18-Aug-2020

Summary

Official Symbol
TEX13Bprovided by HGNC
Official Full Name
testis expressed 13Bprovided by HGNC
Primary source
HGNC:HGNC:11736
See related
Ensembl:ENSG00000170925 MIM:300313
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
TGC3B; TSGA5
Summary
This gene is similar to a mouse gene that is expressed in the testis. [provided by RefSeq, Jul 2008]
Expression
Low expression observed in reference dataset See more
Orthologs

Genomic context

See TEX13B in Genome Data Viewer
Location:
Xq22.3
Exon count:
3
Annotation release Status Assembly Chr Location
109.20200815 current GRCh38.p13 (GCF_000001405.39) X NC_000023.11 (107980864..107982370, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (107224094..107225600, complement)

Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene midline 2 Neighboring gene uncharacterized LOC101928335 Neighboring gene uncharacterized LOC105373310 Neighboring gene NACHT, LRR and PYD domains-containing protein 10-like Neighboring gene NLR family pyrin domain containing 3 pseudogene 1 Neighboring gene V-set and immunoglobulin domain containing 1 Neighboring gene proteasome 26S subunit, non-ATPase 10

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by GOA

Function Evidence Code Pubs
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 

General protein information

Preferred Names
testis-expressed protein 13B
Names
testis expressed sequence 13B
testis-expressed sequence 13B protein

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_015975.1 RefSeqGene

    Range
    5001..6507
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_031273.2NP_112563.1  testis-expressed protein 13B

    See identical proteins and their annotated locations for NP_112563.1

    Status: REVIEWED

    Source sequence(s)
    AF285598, AL034399
    Consensus CDS
    CCDS14534.1
    UniProtKB/Swiss-Prot
    Q9BXU2
    Related
    ENSP00000303777.1, ENST00000302917.1
    Conserved Domains (1) summary
    pfam15186
    Location:5152
    TEX13; Testis-expressed sequence 13 protein family

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20200815

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000023.11 Reference GRCh38.p13 Primary Assembly

    Range
    107980864..107982370 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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