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si:ch211-113a14.22 si:ch211-113a14.22 [ Danio rerio (zebrafish) ]

Gene ID: 560748, updated on 6-May-2021

Summary

Official Symbol
si:ch211-113a14.22provided by ZNC
Official Full Name
si:ch211-113a14.22provided by ZNC
Primary source
ZFIN:ZDB-GENE-121214-203
See related
Ensembl:ENSDARG00000114895
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
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Genomic context

See si:ch211-113a14.22 in Genome Data Viewer
Location:
chromosome: 25
Exon count:
1
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 25 NC_007136.7 (36347078..36347740)
105 previous assembly GRCz10 (GCF_000002035.5) 25 NC_007136.6 (35797350..35798014)
103 previous assembly Zv9 (GCF_000002035.4) 25 NC_007136.5 (37383738..37384329)

Chromosome 25 - NC_007136.7Genomic Context describing neighboring genes Neighboring gene si:ch211-113a14.19 Neighboring gene histone H4 Neighboring gene histone cluster 1 H2A family member 3 Neighboring gene si:ch211-113a14.29

Genomic regions, transcripts, and products

General gene information

Markers

Homology

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables DNA binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 
enables protein heterodimerization activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in nucleosome assembly IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
located_in chromosome IEA
Inferred from Electronic Annotation
more info
 
part_of nucleosome IEA
Inferred from Electronic Annotation
more info
 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007136.7 Reference GRCz11 Primary Assembly

    Range
    36347078..36347740
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_684153.8XP_689245.2  histone H2B 1/2-like

    See identical proteins and their annotated locations for XP_689245.2

    UniProtKB/TrEMBL
    R4GE15
    Related
    ENSDARP00000126726.1, ENSDART00000152449.2
    Conserved Domains (2) summary
    smart00427
    Location:26122
    H2B; Histone H2B
    pfam00125
    Location:26100
    Histone; Core histone H2A/H2B/H3/H4
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