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ptdss1b phosphatidylserine synthase 1b [ Danio rerio (zebrafish) ]

Gene ID: 559442, updated on 4-Jan-2025

Summary

Official Symbol
ptdss1bprovided by ZNC
Official Full Name
phosphatidylserine synthase 1bprovided by ZNC
Primary source
ZFIN:ZDB-GENE-081031-18
See related
Ensembl:ENSDARG00000102114 AllianceGenome:ZFIN:ZDB-GENE-081031-18
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
si:ch211-153f2.6
Summary
Predicted to enable L-serine-phosphatidylethanolamine phosphatidyltransferase activity. Predicted to be involved in phosphatidylserine biosynthetic process. Predicted to act upstream of or within phospholipid biosynthetic process. Predicted to be located in endoplasmic reticulum membrane. Human ortholog(s) of this gene implicated in Lenz-Majewski hyperostotic dwarfism. Orthologous to human PTDSS1 (phosphatidylserine synthase 1). [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
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Genomic context

See ptdss1b in Genome Data Viewer
Location:
chromosome: 19
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 19 NC_007130.7 (46065150..46091509, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 19 NC_007130.6 (46475713..46500919, complement)

Chromosome 19 - NC_007130.7Genomic Context describing neighboring genes Neighboring gene KRIT1 ankyrin repeat containing Neighboring gene nucleoporin 153 Neighboring gene stathmin domain containing 1 Neighboring gene RNA binding motif protein 24a

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General protein information

Preferred Names
phosphatidylserine synthase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007130.7 Reference GRCz11 Primary Assembly

    Range
    46065150..46091509 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_682780.10XP_687872.5  phosphatidylserine synthase 1

    UniProtKB/TrEMBL
    A0A8N7T7D0
    Related
    ENSDARP00000138522.1, ENSDART00000161385.2
    Conserved Domains (1) summary
    pfam03034
    Location:96372
    PSS; Phosphatidyl serine synthase