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mtfmt mitochondrial methionyl-tRNA formyltransferase [ Danio rerio (zebrafish) ]

Gene ID: 556680, updated on 17-Nov-2020

Summary

Official Symbol
mtfmtprovided by ZNC
Official Full Name
mitochondrial methionyl-tRNA formyltransferaseprovided by ZNC
Primary source
ZFIN:ZDB-GENE-060929-120
See related
Ensembl:ENSDARG00000005448
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
mtmft; zgc:152651
Orthologs

Genomic context

See mtfmt in Genome Data Viewer
Location:
chromosome: 7
Exon count:
9
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 7 NC_007118.7 (52753073..52761572)
105 previous assembly GRCz10 (GCF_000002035.5) 7 NC_007118.6 (52478003..52486502)
103 previous assembly Zv9 (GCF_000002035.4) 7 NC_007118.5 (54208153..54216652)

Chromosome 7 - NC_007118.7Genomic Context describing neighboring genes Neighboring gene transcription factor 12 Neighboring gene zinc finger protein 280D Neighboring gene diphosphoinositol pentakisphosphate kinase 1a Neighboring gene microtubule-associated protein 1Aa

Genomic regions, transcripts, and products

Pathways from PubChem

General gene information

Markers

Homology

Clone Names

  • MGC152651

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
hydroxymethyl-, formyl- and related transferase activity IEA
Inferred from Electronic Annotation
more info
 
methionyl-tRNA formyltransferase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
methionyl-tRNA formyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
transferase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
biosynthetic process IEA
Inferred from Electronic Annotation
more info
 
conversion of methionyl-tRNA to N-formyl-methionyl-tRNA IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
conversion of methionyl-tRNA to N-formyl-methionyl-tRNA IEA
Inferred from Electronic Annotation
more info
 
translation IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
mitochondrion IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
methionyl-tRNA formyltransferase, mitochondrial
NP_001071010.2

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001077542.2NP_001071010.2  methionyl-tRNA formyltransferase, mitochondrial

    See identical proteins and their annotated locations for NP_001071010.2

    Status: VALIDATED

    Source sequence(s)
    BC142768, BC153525
    UniProtKB/TrEMBL
    A5PL71, A8E5A7
    Related
    ENSDARP00000053813.6, ENSDART00000053814.8
    Conserved Domains (3) summary
    cd08646
    Location:53246
    FMT_core_Met-tRNA-FMT_N; Methionyl-tRNA formyltransferase, N-terminal hydrolase domain
    TIGR00460
    Location:54358
    fmt; methionyl-tRNA formyltransferase
    pfam02911
    Location:247348
    Formyl_trans_C; Formyl transferase, C-terminal domain

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007118.7 Reference GRCz11 Primary Assembly

    Range
    52753073..52761572
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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