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LOC5566298 isocitrate dehydrogenase [NADP] cytoplasmic [ Aedes aegypti (yellow fever mosquito) ]

Gene ID: 5566298, updated on 23-Mar-2024

Summary

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Gene symbol
LOC5566298
Gene description
isocitrate dehydrogenase [NADP] cytoplasmic
See related
VectorBase:AAEL000746
Gene type
protein coding
RefSeq status
MODEL
Organism
Aedes aegypti
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Culicinae; Aedini; Aedes; Stegomyia
Also known as
AAEL000746
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Genomic context

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Location:
chromosome: 2
Exon count:
2
Annotation release Status Assembly Chr Location
101 current AaegL5.0 (GCF_002204515.2) 2 NC_035108.1 (52098045..52108534)

Chromosome 2 - NC_035108.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110675536 Neighboring gene uncharacterized LOC5566295 Neighboring gene coiled-coil-helix-coiled-coil-helix domain-containing protein 7 Neighboring gene uncharacterized LOC110675537 Neighboring gene uncharacterized LOC110675538 Neighboring gene deoxynucleotidyltransferase terminal-interacting protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_035108.1 Chromosome 2 Reference AaegL5.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. An annotated catalogue of salivary gland transcripts in the adult female mosquito, Aedes aegypti. Ribeiro JM, et al. BMC Genomics, 2007 Jan 4. PMID 17204158, Free PMC Article
  2. The neurotranscriptome of the Aedes aegypti mosquito. Matthews BJ, et al. BMC Genomics, 2016 Jan 6. PMID 26738925, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables isocitrate dehydrogenase (NADP+) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables magnesium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in isocitrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
isocitrate dehydrogenase [NADP] cytoplasmic
Names
NADP-dependent isocitrate dehydrogenase
NADP-specific isocitrate dehydrogenase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Aedes aegypti Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AaegL5.0 Primary Assembly

Genomic

  1. NC_035108.1 Reference AaegL5.0 Primary Assembly

    Range
    52098045..52108534
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001650625.2 → XP_001650675.1  isocitrate dehydrogenase [NADP] cytoplasmic

    See identical proteins and their annotated locations for XP_001650675.1

    UniProtKB/TrEMBL
    Q17NB5, Q1HQW5
    Conserved Domains (1) summary
    PTZ00435
    Location:1 → 409
    PTZ00435; isocitrate dehydrogenase; Provisional
Nucleotide Protein Strain
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Molecular Biology Databases