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LOC554249 uncharacterized LOC554249 [ Homo sapiens (human) ]

Gene ID: 554249, updated on 24-Jul-2021

Summary

Gene symbol
LOC554249
Gene description
uncharacterized LOC554249
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Ubiquitous expression in thyroid (RPKM 4.8), kidney (RPKM 3.8) and 25 other tissues See more
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Genomic context

See LOC554249 in Genome Data Viewer
Location:
9p12
Exon count:
2
Annotation release Status Assembly Chr Location
109.20210514 current GRCh38.p13 (GCF_000001405.39) 9 NC_000009.12 (39873857..39875395)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (42018875..42020413)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene CNTNAP3 pseudogene 6 Neighboring gene glioblastoma down-regulated RNA Neighboring gene fibroblast growth factor 7 pseudogene 3 Neighboring gene RNA, 7SL, cytoplasmic 763, pseudogene Neighboring gene uncharacterized LOC105376050

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_126049.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    CR769767

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20210514

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p13 Primary Assembly

    Range
    39873857..39875395
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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