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ANKRD30BL ankyrin repeat domain 30B like [ Homo sapiens (human) ]

Gene ID: 554226, updated on 11-Sep-2019

Summary

Official Symbol
ANKRD30BLprovided by HGNC
Official Full Name
ankyrin repeat domain 30B likeprovided by HGNC
Primary source
HGNC:HGNC:35167
See related
Ensembl:ENSG00000163046
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
ANKRD30BP3; NCRNA00164
Expression
Restricted expression toward testis (RPKM 7.1) See more
Orthologs

Genomic context

See ANKRD30BL in Genome Data Viewer
Location:
2q21.2
Exon count:
8
Annotation release Status Assembly Chr Location
109.20190905 current GRCh38.p13 (GCF_000001405.39) 2 NC_000002.12 (132147591..132258033, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (132905164..133015542, complement)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene zinc finger domain containing pseudogene Neighboring gene vomeronasal 1 receptor 19 pseudogene Neighboring gene RNA, U6 small nuclear 1132, pseudogene Neighboring gene uncharacterized LOC107985804 Neighboring gene RNA, 18S ribosomal pseudogene Neighboring gene RNA, 5.8S ribosomal pseudogene 5 Neighboring gene uncharacterized LOC105373622 Neighboring gene microRNA 663b Neighboring gene cell division cycle 27 pseudogene 1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

General protein information

Preferred Names
putative ankyrin repeat domain-containing protein 30B-like
Names
ankyrin repeat domain 30B pseudogene 3

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001358416.1NP_001345345.1  putative ankyrin repeat domain-containing protein 30B-like

    Status: VALIDATED

    Description
    Transcript Variant: This variant (3) is inferred to encode a protein.
    Source sequence(s)
    AC098826
    Consensus CDS
    CCDS86883.1
    Related
    ENSP00000386398.1, ENST00000409867.5
    Conserved Domains (2) summary
    cd00204
    Location:66191
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    sd00045
    Location:104135
    ANK; ANK repeat [structural motif]

RNA

  1. NR_027019.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC098826
    Related
    ENST00000295181.6
  2. NR_027020.3 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC097532, AC098826, BC045801
    Related
    ENST00000470729.5
  3. NR_152415.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC097532, AC098826
  4. NR_163999.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC098826
  5. NR_164000.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC098826

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p13 Primary Assembly

    Range
    132147591..132258033 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_002959312.1 RNA Sequence

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