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ubald2 UBA-like domain containing 2 [ Danio rerio (zebrafish) ]

Gene ID: 553806, updated on 27-Mar-2024

Summary

Official Symbol
ubald2provided by ZNC
Official Full Name
UBA-like domain containing 2provided by ZNC
Primary source
ZFIN:ZDB-GENE-050522-185
See related
Ensembl:ENSDARG00000115335 AllianceGenome:ZFIN:ZDB-GENE-050522-185
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
fam100b; zgc:112372
Summary
Is expressed in axial mesoderm; central nervous system; and somite. Orthologous to human UBALD2 (UBA like domain containing 2). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

Location:
chromosome: 3
Exon count:
3
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 3 NC_007114.7 (60684909..60711127, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 3 NC_007114.6 (60605105..60631323, complement)

Chromosome 3 - NC_007114.7Genomic Context describing neighboring genes Neighboring gene major facilitator superfamily domain containing 11 Neighboring gene uncharacterized protein C16orf96 homolog Neighboring gene forkhead box J1a Neighboring gene TSEN54 tRNA splicing endonuclease subunit

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General gene information

Clone Names

  • MGC112372

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
UBA-like domain-containing protein 2
Names
family with sequence similarity 100, member B
protein FAM100B

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001020768.1NP_001018604.1  UBA-like domain-containing protein 2

    See identical proteins and their annotated locations for NP_001018604.1

    Status: PROVISIONAL

    Source sequence(s)
    BC095791
    UniProtKB/Swiss-Prot
    Q502A3
    Related
    ENSDARP00000146655.1, ENSDART00000184119.1
    Conserved Domains (1) summary
    cd14343
    Location:1048
    UBA_F100B_like; UBA-like domain found in protein FAM100B

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007114.7 Reference GRCz11 Primary Assembly

    Range
    60684909..60711127 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)