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mcee methylmalonyl CoA epimerase [ Danio rerio (zebrafish) ]

Gene ID: 553804, updated on 9-Dec-2024

Summary

Official Symbol
mceeprovided by ZNC
Official Full Name
methylmalonyl CoA epimeraseprovided by ZNC
Primary source
ZFIN:ZDB-GENE-050522-368
See related
Ensembl:ENSDARG00000045428 AllianceGenome:ZFIN:ZDB-GENE-050522-368
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
zgc:112343
Summary
Predicted to enable methylmalonyl-CoA epimerase activity. Predicted to be involved in L-methylmalonyl-CoA metabolic process. Orthologous to human MCEE (methylmalonyl-CoA epimerase). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
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Genomic context

See mcee in Genome Data Viewer
Location:
chromosome: 7
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 7 NC_007118.7 (30779785..30783043)
105 previous assembly GRCz10 (GCF_000002035.5) 7 NC_007118.6 (30508635..30511893)

Chromosome 7 - NC_007118.7Genomic Context describing neighboring genes Neighboring gene myotubularin related protein 10 Neighboring gene M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein) Neighboring gene amyloid beta (A4) precursor protein-binding, family A, member 2b Neighboring gene sorbitol dehydrogenase

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General gene information

Clone Names

  • MGC112343

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
enables methylmalonyl-CoA epimerase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables methylmalonyl-CoA epimerase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in L-methylmalonyl-CoA metabolic process IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
methylmalonyl-CoA epimerase, mitochondrial
NP_001018602.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001020766.1NP_001018602.1  methylmalonyl-CoA epimerase, mitochondrial

    See identical proteins and their annotated locations for NP_001018602.1

    Status: PROVISIONAL

    Source sequence(s)
    BC095773
    UniProtKB/TrEMBL
    Q502B7
    Related
    ENSDARP00000066805.4, ENSDART00000066806.6
    Conserved Domains (1) summary
    TIGR03081
    Location:46174
    metmalonyl_epim; methylmalonyl-CoA epimerase

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007118.7 Reference GRCz11 Primary Assembly

    Range
    30779785..30783043
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)