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RPL39P5 ribosomal protein L39 pseudogene 5 [ Homo sapiens (human) ]

Gene ID: 553117, updated on 7-Jul-2024

Summary

Official Symbol
RPL39P5provided by HGNC
Official Full Name
ribosomal protein L39 pseudogene 5provided by HGNC
Primary source
HGNC:HGNC:26015
See related
AllianceGenome:HGNC:26015
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RPL39_7_406
Summary
Predicted to be a structural constituent of ribosome. Predicted to be involved in translation. Predicted to be part of cytosolic large ribosomal subunit. [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

See RPL39P5 in Genome Data Viewer
Location:
3q22.2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (134351736..134352143, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (137096891..137097298, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (134070578..134070985, complement)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:134032557-134033130 Neighboring gene long intergenic non-protein coding RNA 2004 Neighboring gene uncharacterized LOC105374118 Neighboring gene Sharpr-MPRA regulatory regions 684 and 10996 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:134049669-134050234 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:134052314-134053166 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:134053167-134054017 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr3:134059546-134060745 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:134078332-134078892 Neighboring gene Sharpr-MPRA regulatory region 9661 Neighboring gene angiomotin like 2 Neighboring gene microRNA 6827 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:134092549-134093348 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:134093349-134094148 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr3:134094149-134094946 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:134100919-134101418 Neighboring gene high mobility group nucleosome binding domain 1 pseudogene

Genomic regions, transcripts, and products

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Other Names

  • 60 ribosomal protein L39 pseudogene 5

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
part_of cytosolic large ribosomal subunit IBA
Inferred from Biological aspect of Ancestor
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_010827.3 

    Range
    101..508
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

    Range
    134351736..134352143 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060927.1 Alternate T2T-CHM13v2.0

    Range
    137096891..137097298 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)