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ZNF532 zinc finger protein 532 [ Homo sapiens (human) ]

Gene ID: 55205, updated on 22-Jan-2020

Summary

Official Symbol
ZNF532provided by HGNC
Official Full Name
zinc finger protein 532provided by HGNC
Primary source
HGNC:HGNC:30940
See related
Ensembl:ENSG00000074657
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Ubiquitous expression in endometrium (RPKM 20.9), prostate (RPKM 17.9) and 22 other tissues See more
Orthologs

Genomic context

See ZNF532 in Genome Data Viewer
Location:
18q21.32
Exon count:
21
Annotation release Status Assembly Chr Location
109.20191205 current GRCh38.p13 (GCF_000001405.39) 18 NC_000018.10 (58862600..58986480)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 18 NC_000018.9 (56529832..56653709)

Chromosome 18 - NC_000018.10Genomic Context describing neighboring genes Neighboring gene VISTA enhancer hs1397 Neighboring gene RNA, U6 small nuclear 219, pseudogene Neighboring gene long intergenic non-protein coding RNA 1926 Neighboring gene RNA, U2 small nuclear 69, pseudogene Neighboring gene O-acyltransferase like protein-like Neighboring gene O-acyltransferase like, pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • FLJ10697

Gene Ontology Provided by GOA

Function Evidence Code Pubs
DNA binding IEA
Inferred from Electronic Annotation
more info
 
metal ion binding IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
nucleus IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001318726.2NP_001305655.1  zinc finger protein 532 isoform a

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1-9 all encode the same isoform (a).
    Source sequence(s)
    AA807005, AK001559, AK128058, BC130618, DB299524
    Consensus CDS
    CCDS11969.1
    UniProtKB/Swiss-Prot
    Q9HCE3
    UniProtKB/TrEMBL
    A0A024R283, B3KXW2
    Related
    ENSP00000468532.1, ENST00000591083.5
    Conserved Domains (2) summary
    sd00017
    Location:10271047
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam16622
    Location:11991227
    zf-C2H2_11; zinc-finger C2H2-type
  2. NM_001318727.2NP_001305656.1  zinc finger protein 532 isoform a

    Status: VALIDATED

    Description
    Transcript Variant: This variant (3) differs in the 5' UTR compared to variant 1. Variants 1-9 all encode the same isoform (a).
    Source sequence(s)
    AA807005, AB046849, AC090233, AK001559, DA108216, DB299524
    Consensus CDS
    CCDS11969.1
    UniProtKB/Swiss-Prot
    Q9HCE3
    UniProtKB/TrEMBL
    A0A024R283
    Related
    ENSP00000466007.1, ENST00000589288.5
    Conserved Domains (2) summary
    sd00017
    Location:10271047
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam16622
    Location:11991227
    zf-C2H2_11; zinc-finger C2H2-type
  3. NM_001318728.2NP_001305657.1  zinc finger protein 532 isoform a

    Status: VALIDATED

    Description
    Transcript Variant: This variant (4) differs in the 5' UTR compared to variant 1. Variants 1-9 all encode the same isoform (a).
    Source sequence(s)
    AA807005, AK001559, BC036366, DA191371, DB299524
    Consensus CDS
    CCDS11969.1
    UniProtKB/Swiss-Prot
    Q9HCE3
    UniProtKB/TrEMBL
    A0A024R283
    Related
    ENSP00000465709.1, ENST00000591230.5
    Conserved Domains (2) summary
    sd00017
    Location:10271047
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam16622
    Location:11991227
    zf-C2H2_11; zinc-finger C2H2-type
  4. NM_001353525.2NP_001340454.1  zinc finger protein 532 isoform a

    Status: VALIDATED

    Description
    Transcript Variant: This variant (5), as well as variants 1-4 and 6-9, encodes isoform a.
    Source sequence(s)
    AC040963, AC090233
    Consensus CDS
    CCDS11969.1
    Conserved Domains (2) summary
    sd00017
    Location:10271047
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam16622
    Location:11991227
    zf-C2H2_11; zinc-finger C2H2-type
  5. NM_001353526.2NP_001340455.1  zinc finger protein 532 isoform a

    Status: VALIDATED

    Description
    Transcript Variant: This variant (6), as well as variants 1-5 and 7-9, encodes isoform a.
    Source sequence(s)
    AC040963, AC090233
    Consensus CDS
    CCDS11969.1
    Conserved Domains (2) summary
    sd00017
    Location:10271047
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam16622
    Location:11991227
    zf-C2H2_11; zinc-finger C2H2-type
  6. NM_001353527.2NP_001340456.1  zinc finger protein 532 isoform a

    Status: VALIDATED

    Description
    Transcript Variant: This variant (7), as well as variants 1-6, 8, and 9, encodes isoform a.
    Source sequence(s)
    AC040963, AC090233
    Consensus CDS
    CCDS11969.1
    Conserved Domains (2) summary
    sd00017
    Location:10271047
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam16622
    Location:11991227
    zf-C2H2_11; zinc-finger C2H2-type
  7. NM_001353528.2NP_001340457.1  zinc finger protein 532 isoform a

    Status: VALIDATED

    Description
    Transcript Variant: This variant (8), as well as variants 1-7 and 9, encodes isoform a.
    Source sequence(s)
    AC040963, AC090233
    Consensus CDS
    CCDS11969.1
    Conserved Domains (2) summary
    sd00017
    Location:10271047
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam16622
    Location:11991227
    zf-C2H2_11; zinc-finger C2H2-type
  8. NM_001353529.2NP_001340458.1  zinc finger protein 532 isoform a

    Status: VALIDATED

    Description
    Transcript Variant: This variant (9), as well as variants 1-8, encodes isoform a.
    Source sequence(s)
    AC040963, AC090233
    Consensus CDS
    CCDS11969.1
    Conserved Domains (2) summary
    sd00017
    Location:10271047
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam16622
    Location:11991227
    zf-C2H2_11; zinc-finger C2H2-type
  9. NM_001353530.2NP_001340459.1  zinc finger protein 532 isoform b

    Status: VALIDATED

    Description
    Transcript Variant: This variant (10), as well as variants 11 and 12, encodes isoform b.
    Source sequence(s)
    AC040963, AC090233
    Conserved Domains (2) summary
    sd00017
    Location:10271047
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam16622
    Location:11951223
    zf-C2H2_11; zinc-finger C2H2-type
  10. NM_001353531.2NP_001340460.1  zinc finger protein 532 isoform b

    Status: VALIDATED

    Description
    Transcript Variant: This variant (11), as well as variants 10 and 12, encodes isoform b.
    Source sequence(s)
    AC040963, AC090233
    Conserved Domains (2) summary
    sd00017
    Location:10271047
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam16622
    Location:11951223
    zf-C2H2_11; zinc-finger C2H2-type
  11. NM_001353532.2NP_001340461.1  zinc finger protein 532 isoform b

    Status: VALIDATED

    Description
    Transcript Variant: This variant (12), as well as variants 10 and 11, encodes isoform b.
    Source sequence(s)
    AC040963, AC090233
    Conserved Domains (2) summary
    sd00017
    Location:10271047
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam16622
    Location:11951223
    zf-C2H2_11; zinc-finger C2H2-type
  12. NM_001353533.2NP_001340462.1  zinc finger protein 532 isoform c

    Status: VALIDATED

    Source sequence(s)
    AC040963, AC090233
    Conserved Domains (2) summary
    sd00017
    Location:968988
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam16622
    Location:11401168
    zf-C2H2_11; zinc-finger C2H2-type
  13. NM_001353534.2NP_001340463.1  zinc finger protein 532 isoform d

    Status: VALIDATED

    Source sequence(s)
    AC040963, AC090233
    Conserved Domains (2) summary
    sd00017
    Location:968988
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam16622
    Location:11361164
    zf-C2H2_11; zinc-finger C2H2-type
  14. NM_001353535.2NP_001340464.1  zinc finger protein 532 isoform e

    Status: VALIDATED

    Description
    Transcript Variant: This variant (15), as well as variant 16, encodes isoform e.
    Source sequence(s)
    AC040963, AC090233
    Conserved Domains (3) summary
    sd00017
    Location:853873
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13912
    Location:10901112
    zf-C2H2_6; C2H2-type zinc finger
    pfam16622
    Location:10251053
    zf-C2H2_11; zinc-finger C2H2-type
  15. NM_001353536.2NP_001340465.1  zinc finger protein 532 isoform e

    Status: VALIDATED

    Description
    Transcript Variant: This variant (16), as well as variant 15, encodes isoform e.
    Source sequence(s)
    AC040963, AC090233
    Conserved Domains (3) summary
    sd00017
    Location:853873
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13912
    Location:10901112
    zf-C2H2_6; C2H2-type zinc finger
    pfam16622
    Location:10251053
    zf-C2H2_11; zinc-finger C2H2-type
  16. NM_001353537.2NP_001340466.1  zinc finger protein 532 isoform f

    Status: VALIDATED

    Source sequence(s)
    AC040963, AC090233
    Conserved Domains (3) summary
    sd00017
    Location:853873
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13912
    Location:10861108
    zf-C2H2_6; C2H2-type zinc finger
    pfam16622
    Location:10211049
    zf-C2H2_11; zinc-finger C2H2-type
  17. NM_001353538.2NP_001340467.1  zinc finger protein 532 isoform g

    Status: VALIDATED

    Source sequence(s)
    AC040963, AC090233
    Conserved Domains (3) summary
    sd00017
    Location:756778
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13912
    Location:9961018
    zf-C2H2_6; C2H2-type zinc finger
    pfam16622
    Location:931959
    zf-C2H2_11; zinc-finger C2H2-type
  18. NM_001375912.1NP_001362841.1  zinc finger protein 532 isoform a

    Status: VALIDATED

    Source sequence(s)
    AC040963, AC090233
    Related
    ENSP00000468238.1, ENST00000591808.5
  19. NM_001375913.1NP_001362842.1  zinc finger protein 532 isoform c

    Status: VALIDATED

    Source sequence(s)
    AC040963, AC090233
  20. NM_018181.6NP_060651.2  zinc finger protein 532 isoform a

    See identical proteins and their annotated locations for NP_060651.2

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) encodes the longest isoform (a). Variants 1-9 all encode the same isoform (a).
    Source sequence(s)
    AA807005, AF295077, AK128058, BE219488, BF591635
    Consensus CDS
    CCDS11969.1
    UniProtKB/Swiss-Prot
    Q9HCE3
    UniProtKB/TrEMBL
    A0A024R283, B3KXW2
    Related
    ENSP00000338217.4, ENST00000336078.8
    Conserved Domains (2) summary
    sd00017
    Location:10271047
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam16622
    Location:11991227
    zf-C2H2_11; zinc-finger C2H2-type

RNA

  1. NR_148459.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC040963, AC090233
  2. NR_148460.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC040963, AC090233

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20191205

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000018.10 Reference GRCh38.p13 Primary Assembly

    Range
    58862600..58986480
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017025810.1XP_016881299.1  zinc finger protein 532 isoform X2

  2. XM_017025815.1XP_016881304.1  zinc finger protein 532 isoform X4

    UniProtKB/Swiss-Prot
    Q9HCE3
    UniProtKB/TrEMBL
    A0A024R283
    Conserved Domains (2) summary
    sd00017
    Location:10271047
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam16622
    Location:11991227
    zf-C2H2_11; zinc-finger C2H2-type
  3. XM_017025812.1XP_016881301.1  zinc finger protein 532 isoform X4

    UniProtKB/Swiss-Prot
    Q9HCE3
    UniProtKB/TrEMBL
    A0A024R283
    Conserved Domains (2) summary
    sd00017
    Location:10271047
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam16622
    Location:11991227
    zf-C2H2_11; zinc-finger C2H2-type
  4. XM_017025814.1XP_016881303.1  zinc finger protein 532 isoform X4

    UniProtKB/Swiss-Prot
    Q9HCE3
    UniProtKB/TrEMBL
    A0A024R283
    Conserved Domains (2) summary
    sd00017
    Location:10271047
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam16622
    Location:11991227
    zf-C2H2_11; zinc-finger C2H2-type
  5. XM_017025825.2XP_016881314.1  zinc finger protein 532 isoform X8

    Conserved Domains (3) summary
    sd00017
    Location:853873
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13912
    Location:10901112
    zf-C2H2_6; C2H2-type zinc finger
    pfam16622
    Location:10251053
    zf-C2H2_11; zinc-finger C2H2-type
  6. XM_017025811.2XP_016881300.1  zinc finger protein 532 isoform X3

  7. XM_024451199.1XP_024306967.1  zinc finger protein 532 isoform X4

    Conserved Domains (2) summary
    sd00017
    Location:10271047
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam16622
    Location:11991227
    zf-C2H2_11; zinc-finger C2H2-type
  8. XM_017025830.1XP_016881319.1  zinc finger protein 532 isoform X10

  9. XM_017025824.1XP_016881313.1  zinc finger protein 532 isoform X7

  10. XM_017025829.1XP_016881318.1  zinc finger protein 532 isoform X9

  11. XM_017025823.1XP_016881312.1  zinc finger protein 532 isoform X6

  12. XM_017025809.1XP_016881298.1  zinc finger protein 532 isoform X1

  13. XM_011526067.2XP_011524369.1  zinc finger protein 532 isoform X11

    Conserved Domains (2) summary
    sd00017
    Location:785805
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam12756
    Location:834871
    zf-C2H2_2; C2H2 type zinc-finger (2 copies)

RNA

  1. XR_935231.2 RNA Sequence

  2. XR_935229.2 RNA Sequence

  3. XR_002958179.1 RNA Sequence

  4. XR_001753212.1 RNA Sequence

  5. XR_001753211.1 RNA Sequence

  6. XR_001753209.1 RNA Sequence

  7. XR_935228.2 RNA Sequence

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