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LOC551538 lysine--tRNA ligase [ Apis mellifera (honey bee) ]

Gene ID: 551538, updated on 10-Feb-2017
Gene symbol
LOC551538
Gene description
lysine--tRNA ligase
See related
BEEBASE:GB49155
Gene type
protein coding
RefSeq status
MODEL
Organism
Apis mellifera
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Hymenoptera; Apocrita; Aculeata; Apoidea; Apidae; Apis
Also known as
Aats-lys
Location:
chromosome: LG3
Exon count:
8
Annotation release Status Assembly LG Location
103 current Amel_4.5 (GCF_000002195.4) LG3 NC_007072.3 (9610143..9613011, complement)

Linkage Group LG3 - NC_007072.3Genomic Context describing neighboring genes Neighboring gene GDP-fucose protein O-fucosyltransferase 1 Neighboring gene mediator of RNA polymerase II transcription subunit 15 Neighboring gene OTU domain-containing protein 6B Neighboring gene protein PIH1D3-like Neighboring gene transfer RNA threonine (anticodon UGU)

Genomic Sequence:
NC_007072.3 Chromosome LG3 Reference Amel_4.5 Primary Assembly

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Preferred Names
lysine--tRNA ligase
Names
lysyl-tRNA synthetase

RefSeqs of Annotated Genomes: Apis mellifera Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Amel_4.5 Primary Assembly

Genomic

  1. NC_007072.3 Reference Amel_4.5 Primary Assembly

    Range
    9610143..9613011 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_623933.5XP_623936.2  lysine--tRNA ligase isoform X2

    UniProtKB/TrEMBL
    A0A088ACI9
    Conserved Domains (3) summary
    PLN02502
    Location:7564
    PLN02502; lysyl-tRNA synthetase
    cd00775
    Location:224562
    LysRS_core; Lys_tRNA synthetase (LysRS) class II core domain. Class II LysRS is a dimer which attaches a lysine to the 3' OH group of ribose of the appropriate tRNA. Its assignment to class II aaRS is based upon its structure and the presence of three ...
    cd04322
    Location:114221
    LysRS_N; LysRS_N: N-terminal, anticodon recognition domain of lysyl-tRNA synthetases (LysRS). These enzymes are homodimeric class 2b aminoacyl-tRNA synthetases (aaRSs). This domain is a beta-barrel domain (OB fold) involved in binding the tRNA anticodon stem-loop. ...
  2. XM_006567968.2XP_006568031.1  lysine--tRNA ligase isoform X1

    Conserved Domains (3) summary
    PLN02502
    Location:36588
    PLN02502; lysyl-tRNA synthetase
    cd00775
    Location:248586
    LysRS_core; Lys_tRNA synthetase (LysRS) class II core domain. Class II LysRS is a dimer which attaches a lysine to the 3' OH group of ribose of the appropriate tRNA. Its assignment to class II aaRS is based upon its structure and the presence of three ...
    cd04322
    Location:138245
    LysRS_N; LysRS_N: N-terminal, anticodon recognition domain of lysyl-tRNA synthetases (LysRS). These enzymes are homodimeric class 2b aminoacyl-tRNA synthetases (aaRSs). This domain is a beta-barrel domain (OB fold) involved in binding the tRNA anticodon stem-loop. ...
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