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fsip1 fibrous sheath interacting protein 1 [ Danio rerio (zebrafish) ]

Gene ID: 550574, updated on 9-Sep-2025
Official Symbol
fsip1provided by ZNC
Official Full Name
fibrous sheath interacting protein 1provided by ZNC
Primary source
ZFIN:ZDB-GENE-050417-428
See related
AllianceGenome:ZFIN:ZDB-GENE-050417-428
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
zgc:113106
Summary
Orthologous to human FSIP1 (fibrous sheath interacting protein 1). [provided by Alliance of Genome Resources, Jul 2025]
Orthologs
human mouse all
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See fsip1 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2025_04 current GRCz12tu (GCF_049306965.1) 17 NC_133192.1 (630546..668173)
RS_2024_08 previous assembly GRCz11 (GCF_000002035.6) Unplaced Scaffold NW_003335567.1 (24746..51248, complement)
RS_2024_08 previous assembly GRCz11 (GCF_000002035.6) Unplaced Scaffold NW_003336698.1 (36..695)
RS_2024_08 previous assembly GRCz11 (GCF_000002035.6) Unplaced Scaffold NW_008805424.1 (1..296, complement)

Chromosome 17 - NC_133192.1Genomic Context describing neighboring genes Neighboring gene kelch like family member 28 Neighboring gene uncharacterized LOC137488161 Neighboring gene expressed sequence BM035769 Neighboring gene uncharacterized LOC141378490 Neighboring gene thrombospondin 1a Neighboring gene KATNB1-like protein 1 Neighboring gene acid phosphatase 7, tartrate resistant (putative)

Go to nucleotide: Graphics FASTA GenBank

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Related articles in PubMed

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
  2. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

Markers

Homology

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  
Preferred Names
fibrous sheath-interacting protein 1

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001017876.1 → NP_001017876.1  fibrous sheath-interacting protein 1

    See identical proteins and their annotated locations for NP_001017876.1

    Status: PROVISIONAL

    Source sequence(s)
    BC093429
    UniProtKB/Swiss-Prot
    Q566N9
    Conserved Domains (1) summary
    pfam15554
    Location:45 → 328
    FSIP1; FSIP1 family

RefSeqs of Annotated Genomes: GCF_049306965.1-RS_2025_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz12tu Primary Assembly

Genomic

  1. NC_133192.1 Reference GRCz12tu Primary Assembly

    Range
    630546..668173
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_073927250.1 → XP_073783351.1  fibrous sheath-interacting protein 1 isoform X3

  2. XM_073927257.1 → XP_073783358.1  fibrous sheath-interacting protein 1 isoform X7

  3. XM_073927253.1 → XP_073783354.1  fibrous sheath-interacting protein 1 isoform X4

  4. XM_073927259.1 → XP_073783360.1  fibrous sheath-interacting protein 1 isoform X8

  5. XM_073927248.1 → XP_073783349.1  fibrous sheath-interacting protein 1 isoform X1

  6. XM_073927255.1 → XP_073783356.1  fibrous sheath-interacting protein 1 isoform X5

  7. XM_073927249.1 → XP_073783350.1  fibrous sheath-interacting protein 1 isoform X2

  8. XM_073927256.1 → XP_073783357.1  fibrous sheath-interacting protein 1 isoform X6

  9. XM_073927251.1 → XP_073783352.1  fibrous sheath-interacting protein 1 isoform X3

  10. XM_073927258.1 → XP_073783359.1  fibrous sheath-interacting protein 1 isoform X7

  11. XM_073927254.1 → XP_073783355.1  fibrous sheath-interacting protein 1 isoform X4

  12. XM_073927260.1 → XP_073783361.1  fibrous sheath-interacting protein 1 isoform X8

Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q566N9.1 GenPept UniProtKB/Swiss-Prot:Q566N9

Gene LinkOut

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