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cdca7a cell division cycle associated 7a [ Danio rerio (zebrafish) ]

Gene ID: 550236, updated on 6-May-2021

Summary

Official Symbol
cdca7aprovided by ZNC
Official Full Name
cell division cycle associated 7aprovided by ZNC
Primary source
ZFIN:ZDB-GENE-050417-29
See related
Ensembl:ENSDARG00000077620
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
cdca; cdca7; sr:nyz; sb:cb59; sb:cb590; sr:nyz142; zgc:110113
Orthologs
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Genomic context

See cdca7a in Genome Data Viewer
Location:
chromosome: 9
Exon count:
10
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 9 NC_007120.7 (2879759..2892284, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 9 NC_007120.6 (2873743..2886233, complement)
103 previous assembly Zv9 (GCF_000002035.4) 9 NC_007120.5 (2878267..2890765, complement)

Chromosome 9 - NC_007120.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103911600 Neighboring gene sp3a transcription factor Neighboring gene sterile alpha motif and leucine zipper containing kinase AZK Neighboring gene Rap guanine nucleotide exchange factor 4a

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General gene information

Markers

Homology

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
cell division cycle-associated protein 7; cell division cycle-associated protein 7a
Names
cell division cycle associated 7

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001017574.1NP_001017574.1  cell division cycle-associated protein 7a

    See identical proteins and their annotated locations for NP_001017574.1

    Status: PROVISIONAL

    Source sequence(s)
    BC092737
    UniProtKB/TrEMBL
    Q568S8
    Conserved Domains (1) summary
    pfam10497
    Location:285383
    zf-4CXXC_R1; Zinc-finger domain of monoamine-oxidase A repressor R1

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007120.7 Reference GRCz11 Primary Assembly

    Range
    2879759..2892284 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005167416.4XP_005167473.1  cell division cycle-associated protein 7 isoform X2

    UniProtKB/TrEMBL
    B0S4Y9
    Related
    ENSDARP00000117288.1, ENSDART00000140695.3
    Conserved Domains (1) summary
    pfam10497
    Location:299397
    zf-4CXXC_R1; Zinc-finger domain of monoamine-oxidase A repressor R1
  2. XM_005167415.4XP_005167472.1  cell division cycle-associated protein 7 isoform X1

    Conserved Domains (1) summary
    pfam10497
    Location:300398
    zf-4CXXC_R1; Zinc-finger domain of monoamine-oxidase A repressor R1
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