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UBA6-DT UBA6 divergent transcript [ Homo sapiens (human) ]

Gene ID: 550112, updated on 13-May-2022

Summary

Official Symbol
UBA6-DTprovided by HGNC
Official Full Name
UBA6 divergent transcriptprovided by HGNC
Primary source
HGNC:HGNC:49083
See related
Ensembl:ENSG00000248049 AllianceGenome:HGNC:49083
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
UBA6-AS1
Expression
Ubiquitous expression in thyroid (RPKM 4.5), prostate (RPKM 4.4) and 25 other tissues See more
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Genomic context

See UBA6-DT in Genome Data Viewer
Location:
4q13.2
Exon count:
2
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (67701278..67722505)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (71144388..71165615)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (68566996..68588223)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene Sharpr-MPRA regulatory region 12077 Neighboring gene signal transducing adaptor family member 1 Neighboring gene ubiquitin like modifier activating enzyme 6 Neighboring gene small EDRK-rich factor 2-like Neighboring gene dynein, axonemal, assembly factor 5 pseudodgene Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr4:68587217-68588416 Neighboring gene ST3GAL1 pseudogene 1 Neighboring gene tubulin alpha 4a pseudogene Neighboring gene small nucleolar RNA SNORA62/SNORA6 family Neighboring gene gonadotropin releasing hormone receptor

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

General gene information

Markers

Other Names

  • UBA6 antisense RNA 1 (head to head)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_015439.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AK129519, BC043376, DA770515
    Related
    ENST00000506606.1

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

    Range
    67701278..67722505
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060928.1 Alternate T2T-CHM13v2.0

    Range
    71144388..71165615
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)