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hspa13 heat shock protein family A (Hsp70) member 13 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 549977, updated on 5-Mar-2024

Summary

Official Symbol
hspa13provided by Xenbase
Official Full Name
heat shock protein family A (Hsp70) member 13provided by Xenbase
Primary source
Xenbase:XB-GENE-963595
See related
Ensembl:ENSXETG00000005851
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Orthologs
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Genomic context

Location:
chromosome: 2
Exon count:
5
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 2 NC_030678.2 (26580921..26590086, complement)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 2 NC_030678.1 (22410058..22414484, complement)

Chromosome 2 - NC_030678.2Genomic Context describing neighboring genes Neighboring gene erythrocyte band 7 integral membrane protein-like Neighboring gene lipase, member H Neighboring gene SAM domain, SH3 domain and nuclear localization signals 1 Neighboring gene uncharacterized LOC116408764 Neighboring gene nuclear receptor interacting protein 1

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 
enables ATP-dependent protein folding chaperone IEA
Inferred from Electronic Annotation
more info
 
enables nucleotide binding IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 
located_in intracellular membrane-bounded organelle IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
heat shock 70 kDa protein 13
Names
heat shock protein 70kDa family, member 13

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001017223.2NP_001017223.1  heat shock 70 kDa protein 13 precursor

    See identical proteins and their annotated locations for NP_001017223.1

    Status: PROVISIONAL

    Source sequence(s)
    CR760318
    UniProtKB/TrEMBL
    A0A6I8QR99, F7BXR4, Q28IM5
    Related
    ENSXETP00000012873.5, ENSXETT00000012873.5
    Conserved Domains (1) summary
    cd10237
    Location:23468
    HSPA13-like_NBD; Nucleotide-binding domain of human HSPA13 and similar proteins

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030678.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    26580921..26590086 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)