Format

Send to:

Choose Destination

TMEM260 transmembrane protein 260 [ Homo sapiens (human) ]

Gene ID: 54916, updated on 23-Nov-2021

Summary

Official Symbol
TMEM260provided by HGNC
Official Full Name
transmembrane protein 260provided by HGNC
Primary source
HGNC:HGNC:20185
See related
Ensembl:ENSG00000070269 MIM:617449
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
SHDRA; C14orf101
Expression
Ubiquitous expression in thyroid (RPKM 3.9), ovary (RPKM 3.6) and 25 other tissues See more
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See TMEM260 in Genome Data Viewer
Location:
14q22.3
Exon count:
22
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 14 NC_000014.9 (56579792..56660629)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 14 NC_000014.8 (57046516..57116233)

Chromosome 14 - NC_000014.9Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 2284 Neighboring gene uncharacterized LOC101927690 Neighboring gene uncharacterized LOC105370515 Neighboring gene ribosomal protein L36a pseudogene 1 Neighboring gene orthodenticle homeobox 2

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • FLJ20392

Gene Ontology Provided by GOA

Component Evidence Code Pubs
located_in integral component of membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
transmembrane protein 260
Names
UPF0679 protein C14orf101

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_017799.4NP_060269.3  transmembrane protein 260

    See identical proteins and their annotated locations for NP_060269.3

    Status: VALIDATED

    Source sequence(s)
    AK023885, AK056291, AL161757, BX647387
    Consensus CDS
    CCDS9727.2
    UniProtKB/Swiss-Prot
    Q9NX78
    UniProtKB/TrEMBL
    B3KN73
    Related
    ENSP00000261556.6, ENST00000261556.11
    Conserved Domains (1) summary
    pfam11028
    Location:52206
    DUF2723; Protein of unknown function (DUF2723)

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000014.9 Reference GRCh38.p13 Primary Assembly

    Range
    56579792..56660629
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017021379.2XP_016876868.1  transmembrane protein 260 isoform X2

  2. XM_011536851.2XP_011535153.1  transmembrane protein 260 isoform X1

    Conserved Domains (1) summary
    pfam11028
    Location:52206
    DUF2723; Protein of unknown function (DUF2723)
  3. XM_017021380.1XP_016876869.1  transmembrane protein 260 isoform X7

  4. XM_011536853.1XP_011535155.1  transmembrane protein 260 isoform X4

    Conserved Domains (1) summary
    cl21590
    Location:150
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase
  5. XM_011536852.1XP_011535154.1  transmembrane protein 260 isoform X3

  6. XM_006720176.1XP_006720239.1  transmembrane protein 260 isoform X5

  7. XM_006720178.1XP_006720241.1  transmembrane protein 260 isoform X6

    See identical proteins and their annotated locations for XP_006720241.1

  8. XM_024449636.1XP_024305404.1  transmembrane protein 260 isoform X6

RNA

  1. XR_001750386.2 RNA Sequence

  2. XR_001750385.2 RNA Sequence

  3. XR_001750382.2 RNA Sequence

  4. XR_001750387.2 RNA Sequence

  5. XR_245695.2 RNA Sequence

    Related
    ENST00000556422.5
  6. XR_001750384.2 RNA Sequence

Support Center