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dcun1d1 DCN1, defective in cullin neddylation 1, domain containing 1 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 549069, updated on 20-Jun-2018

Summary

Official Symbol
dcun1d1provided by Xenbase
Official Full Name
DCN1, defective in cullin neddylation 1, domain containing 1provided by Xenbase
Primary source
Xenbase:XB-GENE-5967384
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
rp42; scro; tes3; sccro; dcun1l1
Orthologs

Genomic context

See dcun1d1 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
7
Annotation release Status Assembly Chr Location
103 current Xenopus_tropicalis_v9.1 (GCF_000004195.3) 5 NC_030681.1 (96458769..96468999, complement)
102 previous assembly Xtropicalis_v7 (GCF_000004195.2) Unplaced Scaffold NW_004668237.1 (11778052..11788282)

Chromosome 5 - NC_030681.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101734472 Neighboring gene SRY-box 2 Neighboring gene piggyBac transposable element-derived protein 4-like Neighboring gene ATPase, class VI, type 11B Neighboring gene methylcrotonoyl-CoA carboxylase 1 Neighboring gene lysosomal-associated membrane protein 3

Genomic regions, transcripts, and products

General gene information

Homology

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001016315.2NP_001016315.1  DCN1-like protein 1

    See identical proteins and their annotated locations for NP_001016315.1

    Status: PROVISIONAL

    Source sequence(s)
    CR761471
    UniProtKB/TrEMBL
    Q28GA7
    Conserved Domains (2) summary
    cd14411
    Location:151
    UBA_DCNL1; UBA-like domain found in DCN1-like protein 1 (DCNL1) and similar proteins
    pfam03556
    Location:136247
    Cullin_binding; Cullin binding

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_tropicalis_v9.1 Primary Assembly

Genomic

  1. NC_030681.1 Reference Xenopus_tropicalis_v9.1 Primary Assembly

    Range
    96458769..96468999 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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