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fbxl3 F-box and leucine-rich repeat protein 3 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 548882, updated on 15-Nov-2019

Summary

Symbol
fbxl3provided by Xenbase
Full Name
F-box and leucine-rich repeat protein 3provided by Xenbase
Primary source
Xenbase:XB-GENE-1014531
See related
Ensembl:ENSXETG00000008740
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Orthologs

Genomic context

See fbxl3 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
5
Annotation release Status Assembly Chr Location
103 current Xenopus_tropicalis_v9.1 (GCF_000004195.3) 2 NC_030678.1 (122882935..122900820)
102 previous assembly Xtropicalis_v7 (GCF_000004195.2) Unplaced Scaffold NW_004668233.1 (69867980..69885865)

Chromosome 2 - NC_030678.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105946543 Neighboring gene sciellin Neighboring gene MYC binding protein 2, E3 ubiquitin protein ligase Neighboring gene LHFPL tetraspan subfamily member 5 Neighboring gene CLN5, intracellular trafficking protein

Genomic regions, transcripts, and products

Pathways from BioSystems

General gene information

Homology

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001016128.2NP_001016128.1  F-box/LRR-repeat protein 3

    See identical proteins and their annotated locations for NP_001016128.1

    Status: PROVISIONAL

    Source sequence(s)
    CR762059
    UniProtKB/TrEMBL
    Q28FB0
    Related
    ENSXETP00000006563.1, ENSXETT00000017424.1
    Conserved Domains (2) summary
    sd00034
    Location:179204
    LRR_AMN1; leucine-rich repeat [structural motif]
    pfam12937
    Location:4182
    F-box-like; F-box-like

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_tropicalis_v9.1 Primary Assembly

Genomic

  1. NC_030678.1 Reference Xenopus_tropicalis_v9.1 Primary Assembly

    Range
    122882935..122900820
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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