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DNAJC25 DnaJ heat shock protein family (Hsp40) member C25 [ Homo sapiens (human) ]

Gene ID: 548645, updated on 25-Jan-2022

Summary

Official Symbol
DNAJC25provided by HGNC
Official Full Name
DnaJ heat shock protein family (Hsp40) member C25provided by HGNC
Primary source
HGNC:HGNC:34187
See related
Ensembl:ENSG00000059769 AllianceGenome:HGNC:34187
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
bA16L21.2.1
Summary
Predicted to be involved in protein folding. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in endoplasmic reticulum membrane. [provided by Alliance of Genome Resources, Nov 2021]
Expression
Ubiquitous expression in liver (RPKM 12.9), adrenal (RPKM 7.6) and 24 other tissues See more
Orthologs
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Genomic context

See DNAJC25 in Genome Data Viewer
Location:
9q31.3
Exon count:
5
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 9 NC_000009.12 (111631334..111654345)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (114393614..114416625)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene leucine rich repeat containing 37 member A5, pseudogene Neighboring gene uncharacterized LOC107987116 Neighboring gene DNAJC25-GNG10 readthrough Neighboring gene FOXA motif-containing MPRA enhancer 227 Neighboring gene Sharpr-MPRA regulatory region 12797 Neighboring gene G protein subunit gamma 10 Neighboring gene Sharpr-MPRA regulatory region 3205

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Readthrough DNAJC25-GNG10

Readthrough gene: DNAJC25-GNG10, Included gene: GNG10

Homology

Gene Ontology Provided by GOA

Process Evidence Code Pubs
involved_in protein folding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
is_active_in endoplasmic reticulum membrane IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in integral component of membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
dnaJ homolog subfamily C member 25
Names
DnaJ (Hsp40) homolog, subfamily C , member 25
DnaJ-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001015882.3NP_001015882.2  dnaJ homolog subfamily C member 25 precursor

    See identical proteins and their annotated locations for NP_001015882.2

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the shorter transcript but encodes the functional protein.
    Source sequence(s)
    AL135787, BC048318
    Consensus CDS
    CCDS43862.1
    UniProtKB/Swiss-Prot
    Q9H1X3
    Related
    ENSP00000320650.3, ENST00000313525.4
    Conserved Domains (1) summary
    COG0484
    Location:48121
    DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

RNA

  1. NR_037148.2 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) contains an additional internal exon in the 5' region, compared to variant 1. This variant is represented as non-coding because the use of the supported translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
    Source sequence(s)
    AF447177, AL135787, AW629467, DR004317
    Related
    ENST00000447096.1

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p13 Primary Assembly

    Range
    111631334..111654345
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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