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LOC547931 beta-amylase [ Glycine max (soybean) ]

Gene ID: 547931, updated on 3-Feb-2025
Gene symbol
LOC547931
Gene description
beta-amylase
Locus tag
GLYMA_06G301500v4
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Glycine max
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
Also known as
BMY1; Gm-BamyDam; Gm-BamyKza
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See LOC547931 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2025_01 current Glycine_max_v4.0 (GCF_000004515.6) 6 NC_038242.2 (48632643..48635412)
103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 6 NC_038242.1 (49048364..49051133)

Chromosome 6 - NC_038242.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100779766 Neighboring gene dehydration-responsive element-binding protein 2C-like Neighboring gene putative pentatricopeptide repeat-containing protein At3g05240 Neighboring gene transfer RNA alanine (anticodon AGC)

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Crystal structure of recombinant soybean beta-amylase complexed with beta-cyclodextrin. Adachi M, et al. J Biol Chem, 1998 Jul 31. PMID 9677422
  2. The 2.0-A resolution structure of soybean beta-amylase complexed with alpha-cyclodextrin. Mikami B, et al. Biochemistry, 1993 Jul 13. PMID 8334116
  3. Expression and mutation of soybean beta-amylase in Escherichia coli. Totsuka A, et al. Eur J Biochem, 1993 Jun 15. PMID 8319688
  4. Residues essential for catalytic activity of soybean beta-amylase. Totsuka A, et al. Eur J Biochem, 1994 Apr 15. PMID 8174545
  5. Crystal structures of soybean beta-amylase reacted with beta-maltose and maltal: active site components and their apparent roles in catalysis. Mikami B, et al. Biochemistry, 1994 Jun 28. PMID 8011643

See all (12) citations in PubMed

GeneRIFs: Gene References Into Functions

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-amylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in polysaccharide catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
beta-amylase
Names
1,4-alpha-D-glucan maltohydrolase
Gm-BamyTkm1
Gm-BamyTkm2
NP_001236247.2

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001249318.2 → NP_001236247.2  beta-amylase

    Status: VALIDATED

    Source sequence(s)
    ACUP04002348, AK285807
    UniProtKB/TrEMBL
    Q42795, Q588Z3
    Conserved Domains (1) summary
    PLN02801
    Location:5 → 496
    PLN02801; beta-amylase

RefSeqs of Annotated Genomes: GCF_000004515.6-RS_2025_01

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v4.0 Primary Assembly

Genomic

  1. NC_038242.2 Reference Glycine_max_v4.0 Primary Assembly

    Range
    48632643..48635412
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P10538.3 GenPept UniProtKB/Swiss-Prot:P10538

Gene LinkOut

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Molecular Biology Databases
Research Materials