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LOC547759 thioredoxin [ Glycine max (soybean) ]

Gene ID: 547759, updated on 7-Dec-2023

Summary

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Gene symbol
LOC547759
Gene description
thioredoxin
Locus tag
GLYMA_09G240800v4
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Glycine max
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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Genomic context

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Location:
chromosome: 9
Exon count:
3
Annotation release Status Assembly Chr Location
104 current Glycine_max_v4.0 (GCF_000004515.6) 9 NC_038245.2 (46701521..46702122)
103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 9 NC_038245.1 (46319064..46319665)

Chromosome 9 - NC_038245.2Genomic Context describing neighboring genes Neighboring gene peroxisomal voltage-dependent anion-selective channel protein Neighboring gene probable serine/threonine-protein kinase PIX7 Neighboring gene thioredoxin H2 Neighboring gene uncharacterized LOC100793142 Neighboring gene inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase VIP1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Induction of thioredoxin is required for nodule development to reduce reactive oxygen species levels in soybean roots. Lee MY, et al. Plant Physiol, 2005 Dec. PMID 16299179, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein-disulfide reductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
thioredoxin

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001250511.1 → NP_001237440.1  thioredoxin

    See identical proteins and their annotated locations for NP_001237440.1

    Status: PROVISIONAL

    Source sequence(s)
    AY575954
    UniProtKB/TrEMBL
    C6T2B8, Q6PV94
    Conserved Domains (1) summary
    cd02947
    Location:39 → 129
    TRX_family; TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains. Group I TRX is a small ancient protein that alter the redox ...

RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v4.0 Primary Assembly

Genomic

  1. NC_038245.2 Reference Glycine_max_v4.0 Primary Assembly

    Range
    46701521..46702122
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases