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LOC547576 glutathione S-transferase GST 5 [ Glycine max (soybean) ]

Gene ID: 547576, updated on 7-Dec-2023

Summary

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Gene symbol
LOC547576
Gene description
glutathione S-transferase GST 5
Locus tag
GLYMA_01G040200v4
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Glycine max
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
Also known as
GSTU3
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Genomic context

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See LOC547576 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
2
Annotation release Status Assembly Chr Location
104 current Glycine_max_v4.0 (GCF_000004515.6) 1 NC_016088.4 (4337786..4339331)
103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 1 NC_016088.3 (4345774..4347319)

Chromosome 1 - NC_016088.4Genomic Context describing neighboring genes Neighboring gene glutathione S-transferase U17 Neighboring gene tau class glutathione S-transferase Neighboring gene tetratricopeptide repeat protein 38 Neighboring gene uncharacterized LOC100811752

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A genomics approach to the comprehensive analysis of the glutathione S-transferase gene family in soybean and maize. McGonigle B, et al. Plant Physiol, 2000 Nov. PMID 11080288, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glutathione transferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glutathione metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glutathione S-transferase GST 5
Names
tau class glutathione S-transferase

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001251698.1 → NP_001238627.1  glutathione S-transferase GST 5

    See identical proteins and their annotated locations for NP_001238627.1

    Status: PROVISIONAL

    Source sequence(s)
    AF243360
    UniProtKB/TrEMBL
    C6T1K3, Q9FQF3
    Conserved Domains (2) summary
    cd03185
    Location:91 → 221
    GST_C_Tau; C-terminal, alpha helical domain of Class Tau Glutathione S-transferases
    cd03058
    Location:7 → 80
    GST_N_Tau; GST_N family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, ...

RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v4.0 Primary Assembly

Genomic

  1. NC_016088.4 Reference Glycine_max_v4.0 Primary Assembly

    Range
    4337786..4339331
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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