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NUTM2F NUT family member 2F [ Homo sapiens (human) ]

Gene ID: 54754, updated on 17-Jun-2024

Summary

Official Symbol
NUTM2Fprovided by HGNC
Official Full Name
NUT family member 2Fprovided by HGNC
Primary source
HGNC:HGNC:23450
See related
Ensembl:ENSG00000130950 AllianceGenome:HGNC:23450
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
NUTMF; FAM22F
Expression
Biased expression in testis (RPKM 1.2), skin (RPKM 0.1) and 2 other tissues See more
Orthologs
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Genomic context

See NUTM2F in Genome Data Viewer
Location:
9q22.32
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (94318198..94328644, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (106487812..106498251, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (97080480..97090926, complement)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 2603 Neighboring gene uncharacterized LOC124902332 Neighboring gene NANOG hESC enhancer GRCh37_chr9:97012845-97013355 Neighboring gene H3K27ac-H3K4me1 hESC enhancers GRCh37_chr9:97021099-97021744 and GRCh37_chr9:97021745-97022391 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:97022392-97023037 Neighboring gene zinc finger protein 169 Neighboring gene NANOG hESC enhancer GRCh37_chr9:97044568-97045069 Neighboring gene voltage dependent anion channel 1 pseudogene 11 Neighboring gene uncharacterized LOC105376154 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:97080767-97081446 Neighboring gene uncharacterized LOC124902217 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20055 Neighboring gene uncharacterized LOC100132077 Neighboring gene proline-rich nuclear receptor coactivator 2-like Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:97103095-97103595

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General protein information

Preferred Names
NUT family member 2F
Names
family with sequence similarity 22, member F
protein FAM22F

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_017561.2NP_060031.1  NUT family member 2F

    See identical proteins and their annotated locations for NP_060031.1

    Status: VALIDATED

    Source sequence(s)
    AL691447, BC130390
    Consensus CDS
    CCDS47994.1
    UniProtKB/Swiss-Prot
    A1L443, B6ZDF0, Q5SR58, Q5SR59, Q9UFB1
    UniProtKB/TrEMBL
    B7ZLH0
    Related
    ENSP00000253262.4, ENST00000253262.9
    Conserved Domains (1) summary
    pfam12881
    Location:14743
    NUT; NUT protein

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

    Range
    94318198..94328644 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060933.1 Alternate T2T-CHM13v2.0

    Range
    106487812..106498251 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)