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PVX_116490 ribose-phosphate pyrophosphokinase, putative [ Plasmodium vivax (malaria parasite P. vivax) ]

Gene ID: 5475335, updated on 5-Sep-2024
Gene symbol
PVX_116490
Gene description
ribose-phosphate pyrophosphokinase, putative
Locus tag
PVX_116490
See related
PlasmoDB:PVX_116490; VEuPathDB:PVX_116490
Gene type
protein coding
RNA name
ribose-phosphate pyrophosphokinase, putative
RefSeq status
PROVISIONAL
Organism
Plasmodium vivax (strain: Salvador I)
Lineage
Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Plasmodium)
Orthologs
all
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Try the new Transcripts and proteins table
See PVX_116490 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
1
Sequence:
Chromosome: 12; NC_009917.1 (1022937..1025507, complement)

Chromosome 12 - NC_009917.1Genomic Context describing neighboring genes Neighboring gene 20S proteasome beta subunit, putative Neighboring gene hypothetical protein Neighboring gene mRNA decay protein, putative Neighboring gene hypothetical protein

Genomic Sequence:
NC_009917.1

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Comparative genomics of the neglected human malaria parasite Plasmodium vivax. Carlton JM, et al. Nature, 2008 Oct 9. PMID 18843361, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables magnesium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ribose phosphate diphosphokinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in 5-phosphoribose 1-diphosphate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in purine nucleotide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of ribose phosphate diphosphokinase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
ribose-phosphate pyrophosphokinase, putative
XP_001615592.1
  • encoded by transcript PVX_116490A

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_009917.1 Reference assembly

    Range
    1022937..1025507 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001615542.1 → XP_001615592.1  ribose-phosphate pyrophosphokinase, putative [Plasmodium vivax]

    See identical proteins and their annotated locations for XP_001615592.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0J9S830, A0A0J9SRE1, A0A0J9T8H3, A0A0J9WBU4, A0A1G4HGS4, A5K2W1
    Conserved Domains (3) summary
    COG0462
    Location:157 → 532
    PrsA; Phosphoribosylpyrophosphate synthetase [Nucleotide transport and metabolism, Amino acid transport and metabolism]
    pfam13793
    Location:159 → 281
    Pribosyltran_N; N-terminal domain of ribose phosphate pyrophosphokinase
    cl00309
    Location:408 → 536
    PRTases_typeI; Phosphoribosyl transferase (PRT)-type I domain
Nucleotide Protein
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