U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

PVX_092065 spermidine synthase, putative [ Plasmodium vivax (malaria parasite P. vivax) ]

Gene ID: 5474702, updated on 5-Sep-2024
Gene symbol
PVX_092065
Gene description
spermidine synthase, putative
Locus tag
PVX_092065
See related
PlasmoDB:PVX_092065; VEuPathDB:PVX_092065
Gene type
protein coding
RNA name
spermidine synthase, putative
RefSeq status
PROVISIONAL
Organism
Plasmodium vivax (strain: Salvador I)
Lineage
Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Plasmodium)
Orthologs
all
Try the new Gene page
Try the new Transcripts and proteins table
See PVX_092065 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
4
Sequence:
Chromosome: 9; NC_009914.1 (1063132..1065600)

Chromosome 9 - NC_009914.1Genomic Context describing neighboring genes Neighboring gene GPI8p transamidase, putative Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene 26S proteasome regulatory complex subunit, putative

Genomic Sequence:
NC_009914.1

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Comparative genomics of the neglected human malaria parasite Plasmodium vivax. Carlton JM, et al. Nature, 2008 Oct 9. PMID 18843361, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Repeated regions

  • Loc: 1064211-1064232 rpt_type = tandem , rpt_unit_seq = a , satellite = microsatellite

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables spermidine synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in spermidine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
spermidine synthase, putative
XP_001615406.1
  • encoded by transcript PVX_092065A

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_009914.1 Reference assembly

    Range
    1063132..1065600
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001615356.1 → XP_001615406.1  spermidine synthase, putative [Plasmodium vivax]

    See identical proteins and their annotated locations for XP_001615406.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0J9SBI2, A0A0J9VIK8, A0A0J9VZG9, A0A0J9WDV2, A0A1G4GXR4, A0A564ZVA9, A5K4V1
    Conserved Domains (1) summary
    cl17173
    Location:42 → 320
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases