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SLC35F2 solute carrier family 35 member F2 [ Homo sapiens (human) ]

Gene ID: 54733, updated on 6-Sep-2021

Summary

Official Symbol
SLC35F2provided by HGNC
Official Full Name
solute carrier family 35 member F2provided by HGNC
Primary source
HGNC:HGNC:23615
See related
Ensembl:ENSG00000110660
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
HSNOV1
Expression
Broad expression in prostate (RPKM 10.7), skin (RPKM 7.0) and 22 other tissues See more
Orthologs
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Genomic context

See SLC35F2 in Genome Data Viewer
Location:
11q22.3
Exon count:
8
Annotation release Status Assembly Chr Location
109.20210514 current GRCh38.p13 (GCF_000001405.39) 11 NC_000011.10 (107790991..107858787, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 11 NC_000011.9 (107661717..107729513, complement)

Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene sarcolipin Neighboring gene sorting nexin 7 pseudogene Neighboring gene ribosomal protein lateral stalk subunit P2 pseudogene 3 Neighboring gene RAB39A, member RAS oncogene family

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Phenotypes

Associated conditions

Description Tests
Identification of risk loci with shared effects on five major psychiatric disorders: a genome-wide analysis.
GeneReviews: Not available

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • FLJ13018, DKFZp667H1615

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
enables transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 
located_in integral component of membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
solute carrier family 35 member F2
Names
lung squamous cell cancer related protein LSCC-3

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_017515.5NP_059985.2  solute carrier family 35 member F2

    See identical proteins and their annotated locations for NP_059985.2

    Status: VALIDATED

    Source sequence(s)
    AP001024, BC048302
    Consensus CDS
    CCDS41709.1
    UniProtKB/Swiss-Prot
    Q8IXU6
    Related
    ENSP00000436785.1, ENST00000525815.6
    Conserved Domains (1) summary
    pfam06027
    Location:35334
    SLC35F; Solute carrier family 35

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20210514

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000011.10 Reference GRCh38.p13 Primary Assembly

    Range
    107790991..107858787 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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