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Nap1l3 nucleosome assembly protein 1-like 3 [ Mus musculus (house mouse) ]

Gene ID: 54561, updated on 26-Sep-2022

Summary

Official Symbol
Nap1l3provided by MGI
Official Full Name
nucleosome assembly protein 1-like 3provided by MGI
Primary source
MGI:MGI:1859565
See related
Ensembl:ENSMUSG00000055733 AllianceGenome:MGI:1859565
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
MB20
Summary
Predicted to enable chromatin binding activity and histone binding activity. Predicted to be involved in nucleosome assembly. Predicted to be located in cytoplasm. Predicted to be active in chromatin and nucleus. Is expressed in dorsal root ganglion; facial ganglion; glossopharyngeal ganglion; trigeminal ganglion; and vestibulo-cochlear ganglion. Orthologous to human NAP1L3 (nucleosome assembly protein 1 like 3). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

See Nap1l3 in Genome Data Viewer
Location:
X; X E3
Exon count:
1
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) X NC_000086.8 (121304257..121307082, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (122394560..122397385, complement)

Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene tripartite motif-containing 5 pseudogene Neighboring gene helicase-like transcription factor pseudogene Neighboring gene family with sequence similarity 133, member B pseudogene Neighboring gene nucleolin pseudogene

Genomic regions, transcripts, and products

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (2) 

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables chromatin binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables histone binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Process Evidence Code Pubs
involved_in nucleosome assembly IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
is_active_in chromatin IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
nucleosome assembly protein 1-like 3
Names
brain-specific protein MB20

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_138742.1NP_620081.1  nucleosome assembly protein 1-like 3

    See identical proteins and their annotated locations for NP_620081.1

    Status: VALIDATED

    Source sequence(s)
    BC020176
    Consensus CDS
    CCDS30372.1
    UniProtKB/Swiss-Prot
    O54802, Q794H2
    Related
    ENSMUSP00000078453.5, ENSMUST00000079490.6
    Conserved Domains (2) summary
    pfam00956
    Location:352524
    NAP; Nucleosome assembly protein (NAP)
    cl08298
    Location:117157
    NAP; Nucleosome assembly protein (NAP)

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000086.8 Reference GRCm39 C57BL/6J

    Range
    121304257..121307082 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)