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EPB41L4A-DT EPB41L4A divergent transcript [ Homo sapiens (human) ]

Gene ID: 54508, updated on 10-Oct-2023

Summary

Official Symbol
EPB41L4A-DTprovided by HGNC
Official Full Name
EPB41L4A divergent transcriptprovided by HGNC
Primary source
HGNC:HGNC:25643
See related
Ensembl:ENSG00000278921 AllianceGenome:HGNC:25643
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
EPB41L4A-AS2
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Genomic context

See EPB41L4A-DT in Genome Data Viewer
Location:
5q22.2
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 5 NC_000005.10 (112419583..112420978)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 5 NC_060929.1 (112930025..112931420)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (111755280..111756675)

Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene erythrocyte membrane protein band 4.1 like 4A Neighboring gene uncharacterized LOC124901044 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr5:111553293-111553794 Neighboring gene uncharacterized LOC101927023 Neighboring gene NANOG hESC enhancer GRCh37_chr5:111573109-111573620 Neighboring gene NANOG hESC enhancer GRCh37_chr5:111665295-111665825 Neighboring gene Sharpr-MPRA regulatory region 6283 Neighboring gene MPRA-validated peak5419 silencer Neighboring gene H3K4me1 hESC enhancer GRCh37_chr5:111722519-111723020 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr5:111723021-111723520 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 16236 Neighboring gene high mobility group box 3 pseudogene 16 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr5:111839317-111839816 Neighboring gene uncharacterized LOC124901043 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr5:111858695-111859196

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Other Names

  • EPB41L4A antisense RNA 2 (head to head)

Clone Names

  • FLJ11235

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_027706.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AK002097, BX089466
    Related
    ENST00000623705.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000005.10 Reference GRCh38.p14 Primary Assembly

    Range
    112419583..112420978
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060929.1 Alternate T2T-CHM13v2.0

    Range
    112930025..112931420
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_019033.1: Suppressed sequence

    Description
    NM_019033.1: This RefSeq record was removed by NCBI staff. Contact info@ncbi.nlm.nih.gov for further information.