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HCG4 HLA complex group 4 [ Homo sapiens (human) ]

Gene ID: 54435, updated on 25-Jan-2022

Summary

Official Symbol
HCG4provided by HGNC
Official Full Name
HLA complex group 4provided by HGNC
Primary source
HGNC:HGNC:21241
See related
AllianceGenome:HGNC:21241
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
HCG4P10; HCGIV.9; HCGIV-10
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Genomic context

See HCG4 in Genome Data Viewer
Location:
6p22.1
Exon count:
1
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 6 NC_000006.12 (29791031..29793073, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (29758808..29760850, complement)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene interferon induced transmembrane protein 4 pseudogene Neighboring gene HLA complex group 26 (non-protein coding) pseudogene Neighboring gene major histocompatibility complex, class I, V (pseudogene) Neighboring gene HLA complex group 4 pseudogene 9 Neighboring gene major histocompatibility complex, class I, P (pseudogene) Neighboring gene ribosomal protein L7a pseudogene 7

Genomic regions, transcripts, and products

General gene information

Markers

Other Names

  • HCGIV-10 pseudogene
  • HLA complex group 4 (non-protein coding)
  • HLA complex group 4 pseudogene 10

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_002139.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AF036977, BC011879, BC021249

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p13 Primary Assembly

    Range
    29791031..29793073 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p13 ALT_REF_LOCI_1

Genomic

  1. NT_167244.2 Reference GRCh38.p13 ALT_REF_LOCI_1

    Range
    1056864..1058883 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p13 ALT_REF_LOCI_2

Genomic

  1. NT_113891.3 Reference GRCh38.p13 ALT_REF_LOCI_2

    Range
    1274814..1276833 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p13 ALT_REF_LOCI_3

Genomic

  1. NT_167245.2 Reference GRCh38.p13 ALT_REF_LOCI_3

    Range
    1054016..1056058 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p13 ALT_REF_LOCI_4

Genomic

  1. NT_167246.2 Reference GRCh38.p13 ALT_REF_LOCI_4

    Range
    1053607..1055649 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p13 ALT_REF_LOCI_5

Genomic

  1. NT_167247.2 Reference GRCh38.p13 ALT_REF_LOCI_5

    Range
    1053682..1055724 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p13 ALT_REF_LOCI_6

Genomic

  1. NT_167248.2 Reference GRCh38.p13 ALT_REF_LOCI_6

    Range
    1054016..1056035 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p13 ALT_REF_LOCI_7

Genomic

  1. NT_167249.2 Reference GRCh38.p13 ALT_REF_LOCI_7

    Range
    1097182..1099224 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NG_002741.3: Suppressed sequence

    Description
    NG_002741.3: This RefSeq was permanently suppressed because it is now thought that this gene is transcribed.
  2. NM_018985.1: Suppressed sequence

    Description
    NM_018985.1: This RefSeq record was removed by NCBI staff. Contact info@ncbi.nlm.nih.gov for further information.
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