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Ncapg non-SMC condensin I complex, subunit G [ Mus musculus (house mouse) ]

Gene ID: 54392, updated on 23-Jun-2021

Summary

Official Symbol
Ncapgprovided by MGI
Official Full Name
non-SMC condensin I complex, subunit Gprovided by MGI
Primary source
MGI:MGI:1930197
See related
Ensembl:ENSMUSG00000015880
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Hca; Hcapg; MFT.M05.13; 5730507H05Rik
Expression
Biased expression in liver E14 (RPKM 14.6), CNS E11.5 (RPKM 13.6) and 10 other tissues See more
Orthologs
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Genomic context

See Ncapg in Genome Data Viewer
Location:
5; 5 B3
Exon count:
21
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (45827212..45858491)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (45669891..45700547)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 5 NC_000071.5 (46061164..46091786)

Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 1600023N17 gene Neighboring gene DDB1 and CUL4 associated factor 16 pseudogene Neighboring gene ligand dependent nuclear receptor corepressor-like Neighboring gene predicted gene 3414 Neighboring gene SCAN domain containing 3 pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

Clone Names

  • MGC169458

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in mitotic chromosome condensation IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in mitotic chromosome condensation ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
is_active_in condensed chromosome IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in condensed chromosome IDA
Inferred from Direct Assay
more info
PubMed 
located_in condensed chromosome, centromeric region IDA
Inferred from Direct Assay
more info
PubMed 
part_of condensin complex IDA
Inferred from Direct Assay
more info
PubMed 
part_of condensin complex ISO
Inferred from Sequence Orthology
more info
 
part_of condensin complex TAS
Traceable Author Statement
more info
PubMed 
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in cytoplasm IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
condensin complex subunit 3
Names
chromosome condensation protein G
on-SMC condensin I complex, subunit G

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_019438.1NP_062311.1  condensin complex subunit 3

    Status: PROVISIONAL

    Source sequence(s)
    AC093341, AK017756, AK136254, CJ068152, CX564513
    Consensus CDS
    CCDS51498.1
    UniProtKB/TrEMBL
    E9PWG6
    Related
    ENSMUSP00000112871.2, ENSMUST00000117396.3
    Conserved Domains (3) summary
    pfam12719
    Location:557859
    Cnd3; Nuclear condensing complex subunits, C-term domain
    pfam13646
    Location:103204
    HEAT_2; HEAT repeats
    sd00044
    Location:212234
    HEAT; HEAT repeat [structural motif]

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000071.7 Reference GRCm39 C57BL/6J

    Range
    45827212..45858491
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_004942540.1 RNA Sequence

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