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BCIN_12g01310 hypothetical protein [ Botrytis cinerea B05.10 ]

Gene ID: 5438455, updated on 21-Dec-2023

Summary

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Gene symbol
BCIN_12g01310
Gene description
hypothetical protein
Locus tag
BCIN_12g01310
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Botrytis cinerea B05.10 (strain: B05.10)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes; Helotiales; Sclerotiniaceae; Botrytis
Old locus tag
BC1G_03436
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Genomic context

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Location:
chromosome: 12
Exon count:
2
Sequence:
Chromosome: 12; NC_037321.1 (453657..457682, complement)

Chromosome 12 - NC_037321.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037321.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A gapless genome sequence of the fungus Botrytis cinerea. Van Kan JA, et al. Mol Plant Pathol, 2017 Jan. PMID 26913498, Free PMC Article
  2. Genome update of Botrytis cinerea strains B05.10 and T4. Staats M, et al. Eukaryot Cell, 2012 Nov. PMID 23104368, Free PMC Article
  3. Genomic analysis of the necrotrophic fungal pathogens Sclerotinia sclerotiorum and Botrytis cinerea. Amselem J, et al. PLoS Genet, 2011 Aug. PMID 21876677, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables histone deacetylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_037321.1 Reference assembly

    Range
    453657..457682 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001557804.2 → XP_001557854.1  hypothetical protein BCIN_12g01310 [Botrytis cinerea B05.10]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A384JYU1, M7UVM2
    Conserved Domains (4) summary
    cd09998
    Location:191 → 607
    HDAC_Hos3; Class II histone deacetylases Hos3 and related proteins
    pfam01265
    Location:1037 → 1149
    Cyto_heme_lyase; Cytochrome c/c1 heme lyase
    pfam08601
    Location:4 → 113
    PAP1; Transcription factor PAP1
    cl25574
    Location:760 → 1010
    TOP2c; TopoisomeraseII
Nucleotide Protein
Heading Accession and Version

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