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LOC542358 phosphoglucomutase 2 [ Zea mays ]

Gene ID: 542358, updated on 14-Dec-2023

Summary

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Gene symbol
LOC542358
Gene description
phosphoglucomutase 2
Locus tag
ZEAMMB73_Zm00001d033746
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Zea mays
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Also known as
GRMZM2G023289
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Genomic context

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See LOC542358 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
18
Annotation release Status Assembly Chr Location
103 current Zm-B73-REFERENCE-NAM-5.0 (GCF_902167145.1) 1 NC_050096.1 (274475712..274481987)
102.20200423 previous assembly B73 RefGen_v4 (GCF_000005005.2) 1 NC_024459.2 (272697928..272704203)

Chromosome 1 - NC_050096.1Genomic Context describing neighboring genes Neighboring gene atypical receptor-like kinase MARK Neighboring gene uncharacterized LOC103643898 Neighboring gene glutamine synthetase 2 Neighboring gene cyclin-dependent kinase A-1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Molecular and biochemical characterization of cytosolic phosphoglucomutase in maize. Expression during development and in response to oxygen deprivation. Manjunath S, et al. Plant Physiol, 1998 Jul. PMID 9662542, Free PMC Article
  2. Characterization of the maize endosperm transcriptome and its comparison to the rice genome. Lai J, et al. Genome Res, 2004 Oct. PMID 15466291, Free PMC Article
  3. Deep sampling of the Palomero maize transcriptome by a high throughput strategy of pyrosequencing. Vega-Arreguín JC, et al. BMC Genomics, 2009 Jul 6. PMID 19580677, Free PMC Article
  4. Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs. Soderlund C, et al. PLoS Genet, 2009 Nov. PMID 19936069, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables magnesium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphoglucomutase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphoglucomutase, cytoplasmic 2
Names
PGM 2
glucose phosphomutase 2
phosphoglucomutase1
NP_001105405.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001111935.1 → NP_001105405.1  phosphoglucomutase, cytoplasmic 2

    See identical proteins and their annotated locations for NP_001105405.1

    Status: PROVISIONAL

    Source sequence(s)
    U89342
    UniProtKB/Swiss-Prot
    P93805
    UniProtKB/TrEMBL
    A0A1D6GJ75, C0PHV6
    Conserved Domains (2) summary
    cd03085
    Location:10 → 583
    PGM1; Phosphoglucomutase 1 (PGM1) catalyzes the bidirectional interconversion of glucose-1-phosphate (G-1-P) and glucose-6-phosphate (G-6-P) via a glucose 1,6-diphosphate intermediate, an important metabolic step in prokaryotes and eukaryotes. In one direction, ...
    PLN02307
    Location:1 → 583
    PLN02307; phosphoglucomutase

RefSeqs of Annotated Genomes: Zea mays Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

Genomic

  1. NC_050096.1 Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

    Range
    274475712..274481987
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P93805.2 GenPept UniProtKB/Swiss-Prot:P93805

Gene LinkOut

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Molecular Biology Databases