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LOC542299 stress-induced protein 1 [ Zea mays ]

Gene ID: 542299, updated on 14-Dec-2023

Summary

Gene symbol
LOC542299
Gene description
stress-induced protein 1
Locus tag
ZEAMMB73_Zm00001d021901
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Zea mays
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Also known as
Zlp; sip1; GRMZM2G374971
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Genomic context

See LOC542299 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
1
Annotation release Status Assembly Chr Location
103 current Zm-B73-REFERENCE-NAM-5.0 (GCF_902167145.1) 7 NC_050102.1 (169286807..169287734, complement)
102.20200423 previous assembly B73 RefGen_v4 (GCF_000005005.2) 7 NC_024465.2 (165699534..165700461, complement)

Chromosome 7 - NC_050102.1Genomic Context describing neighboring genes Neighboring gene pheophytinase, chloroplastic Neighboring gene uncharacterized LOC100278316 Neighboring gene uncharacterized LOC100381963 Neighboring gene glucan endo-1,3-beta-glucosidase 4

Genomic regions, transcripts, and products

General protein information

Preferred Names
zeamatin
Names
chem4
protein P21
putative thaumatin domain family protein
stress-induced protein1
zeamatin-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001111886.2NP_001105356.1  zeamatin precursor

    See identical proteins and their annotated locations for NP_001105356.1

    Status: VALIDATED

    Source sequence(s)
    BT064401
    UniProtKB/Swiss-Prot
    P33679
    UniProtKB/TrEMBL
    B8QY30, C0P7Y2, Q2XXK4
    Conserved Domains (1) summary
    smart00205
    Location:24227
    THN; Thaumatin family

RefSeqs of Annotated Genomes: Zea mays Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

Genomic

  1. NC_050102.1 Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

    Range
    169286807..169287734 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)