U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC542291 general regulatory factor 1 [ Zea mays ]

Gene ID: 542291, updated on 27-Nov-2024

Summary

Gene symbol
LOC542291
Gene description
general regulatory factor 1
Locus tag
ZEAMMB73_Zm00001d003401
See related
EnsemblRapid:Zm00001eb080570
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Zea mays
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Also known as
grf1; GF14-6; GRMZM2G102499
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See LOC542291 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
6
Annotation release Status Assembly Chr Location
103 current Zm-B73-REFERENCE-NAM-5.0 (GCF_902167145.1) 2 NC_050097.1 (43076943..43080536, complement)
102.20200423 previous assembly B73 RefGen_v4 (GCF_000005005.2) 2 NC_024460.2 (43088774..43092367, complement)

Chromosome 2 - NC_050097.1Genomic Context describing neighboring genes Neighboring gene probable inactive receptor kinase RLK902 Neighboring gene uncharacterized LOC103646357 Neighboring gene uncharacterized LOC100285837 Neighboring gene lysine histidine transporter-like 6 Neighboring gene uncharacterized LOC100382921 Neighboring gene protease inhibitor/seed storage/LTP family protein

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
14-3-3-like protein GF14-6
Names
AY110485_SNP
CL1980_1
CL1980_1a
CL1980_2
CL1980_2b
GF14
cl1980_1(131)
gbf14
regulatory protein

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001363909.1NP_001350838.1  14-3-3-like protein GF14-6

    Status: VALIDATED

    Source sequence(s)
    AI622731, EU965250
    UniProtKB/Swiss-Prot
    P49106, Q01526
    UniProtKB/TrEMBL
    A0A3L6FUT9, B7ZYI0
    Related
    Zm00001eb080570_P001, Zm00001eb080570_T001
    Conserved Domains (1) summary
    smart00101
    Location:8251
    14_3_3; 14-3-3 homologues

RefSeqs of Annotated Genomes: Zea mays Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

Genomic

  1. NC_050097.1 Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

    Range
    43076943..43080536 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020548013.3XP_020403602.1  14-3-3-like protein GF14-6 isoform X1

    UniProtKB/Swiss-Prot
    P49106, Q01526
    UniProtKB/TrEMBL
    A0A3L6FUT9, B7ZYI0
    Related
    Zm00001eb080570_P002, Zm00001eb080570_T002
    Conserved Domains (1) summary
    smart00101
    Location:8251
    14_3_3; 14-3-3 homologues

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001111880.2: Suppressed sequence

    Description
    NM_001111880.2: This RefSeq was removed because currently there is insufficient support for the transcript and the protein.