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EOLA2 endothelium and lymphocyte associated ASCH domain 2 [ Homo sapiens (human) ]

Gene ID: 541578, updated on 12-Aug-2022

Summary

Official Symbol
EOLA2provided by HGNC
Official Full Name
endothelium and lymphocyte associated ASCH domain 2provided by HGNC
Primary source
HGNC:HGNC:17402
See related
Ensembl:ENSG00000197021 AllianceGenome:HGNC:17402
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
CXorf40B
Expression
Ubiquitous expression in adrenal (RPKM 9.8), placenta (RPKM 4.0) and 25 other tissues See more
Orthologs
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Genomic context

See EOLA2 in Genome Data Viewer
Location:
Xq28
Exon count:
8
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (149929532..149938491, complement)
110 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (148199823..148206117, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (149100415..149106709, complement)

Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 850 Neighboring gene MAGEA8 antisense RNA 1 Neighboring gene MAGE family member A8 Neighboring gene EOLA2 divergent transcript Neighboring gene heat shock transcription factor family, X-linked member 4 Neighboring gene nucleolar protein 11 pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Markers

Homology

Clone Names

  • FLJ16523

General protein information

Preferred Names
protein EOLA2
Names
protein CXorf40B

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001013845.2NP_001013867.1  protein EOLA2

    See identical proteins and their annotated locations for NP_001013867.1

    Status: VALIDATED

    Source sequence(s)
    BC009523, BM847839, U66042
    Consensus CDS
    CCDS35426.1
    UniProtKB/Swiss-Prot
    Q96DE9
    Related
    ENSP00000359434.3, ENST00000370406.8
    Conserved Domains (1) summary
    smart01022
    Location:6108
    ASCH; The ASCH domain adopts a beta-barrel fold similar to that of the PUA domain

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

    Range
    149929532..149938491 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024452391.2XP_024308159.1  protein EOLA2 isoform X2

    UniProtKB/TrEMBL
    Q5HY62
    Conserved Domains (1) summary
    smart01022
    Location:6108
    ASCH; The ASCH domain adopts a beta-barrel fold similar to that of the PUA domain
  2. XM_047442179.1XP_047298135.1  protein EOLA2 isoform X2

    UniProtKB/TrEMBL
    Q5HY62
  3. XM_011531181.4XP_011529483.1  protein EOLA2 isoform X2

    UniProtKB/TrEMBL
    Q5HY62
    Related
    ENSP00000417546.1, ENST00000462691.5
    Conserved Domains (1) summary
    smart01022
    Location:6108
    ASCH; The ASCH domain adopts a beta-barrel fold similar to that of the PUA domain
  4. XM_017029593.3XP_016885082.1  protein EOLA2 isoform X2

    UniProtKB/TrEMBL
    Q5HY62
    Conserved Domains (1) summary
    smart01022
    Location:6108
    ASCH; The ASCH domain adopts a beta-barrel fold similar to that of the PUA domain
  5. XM_017029592.3XP_016885081.1  protein EOLA2 isoform X2

    UniProtKB/TrEMBL
    Q5HY62
    Conserved Domains (1) summary
    smart01022
    Location:6108
    ASCH; The ASCH domain adopts a beta-barrel fold similar to that of the PUA domain
  6. XM_047442178.1XP_047298134.1  protein EOLA2 isoform X2

    UniProtKB/TrEMBL
    Q5HY62
  7. XM_017029591.3XP_016885080.1  protein EOLA2 isoform X2

    UniProtKB/TrEMBL
    Q5HY62
    Conserved Domains (1) summary
    smart01022
    Location:6108
    ASCH; The ASCH domain adopts a beta-barrel fold similar to that of the PUA domain
  8. XM_047442177.1XP_047298133.1  protein EOLA2 isoform X2

    UniProtKB/TrEMBL
    Q5HY62
  9. XM_005274702.4XP_005274759.1  protein EOLA2 isoform X1

    See identical proteins and their annotated locations for XP_005274759.1

    UniProtKB/Swiss-Prot
    Q96DE9
    Related
    ENSP00000347339.2, ENST00000355203.6
    Conserved Domains (1) summary
    smart01022
    Location:6108
    ASCH; The ASCH domain adopts a beta-barrel fold similar to that of the PUA domain
  10. XM_006724826.4XP_006724889.1  protein EOLA2 isoform X1

    See identical proteins and their annotated locations for XP_006724889.1

    UniProtKB/Swiss-Prot
    Q96DE9
    Conserved Domains (1) summary
    smart01022
    Location:6108
    ASCH; The ASCH domain adopts a beta-barrel fold similar to that of the PUA domain
  11. XM_005274700.3XP_005274757.1  protein EOLA2 isoform X1

    See identical proteins and their annotated locations for XP_005274757.1

    UniProtKB/Swiss-Prot
    Q96DE9
    Related
    ENSP00000474324.1, ENST00000370409.7
    Conserved Domains (1) summary
    smart01022
    Location:6108
    ASCH; The ASCH domain adopts a beta-barrel fold similar to that of the PUA domain
  12. XM_005274698.3XP_005274755.1  protein EOLA2 isoform X1

    See identical proteins and their annotated locations for XP_005274755.1

    UniProtKB/Swiss-Prot
    Q96DE9
    Related
    ENSP00000359432.1, ENST00000370404.5
    Conserved Domains (1) summary
    smart01022
    Location:6108
    ASCH; The ASCH domain adopts a beta-barrel fold similar to that of the PUA domain
  13. XM_005274699.3XP_005274756.1  protein EOLA2 isoform X1

    See identical proteins and their annotated locations for XP_005274756.1

    UniProtKB/Swiss-Prot
    Q96DE9
    Conserved Domains (1) summary
    smart01022
    Location:6108
    ASCH; The ASCH domain adopts a beta-barrel fold similar to that of the PUA domain
  14. XM_047442174.1XP_047298130.1  protein EOLA2 isoform X1

    UniProtKB/Swiss-Prot
    Q96DE9
  15. XM_017029585.3XP_016885074.1  protein EOLA2 isoform X1

    UniProtKB/Swiss-Prot
    Q96DE9
    Conserved Domains (1) summary
    smart01022
    Location:6108
    ASCH; The ASCH domain adopts a beta-barrel fold similar to that of the PUA domain
  16. XM_005274701.4XP_005274758.1  protein EOLA2 isoform X1

    See identical proteins and their annotated locations for XP_005274758.1

    UniProtKB/Swiss-Prot
    Q96DE9
    Conserved Domains (1) summary
    smart01022
    Location:6108
    ASCH; The ASCH domain adopts a beta-barrel fold similar to that of the PUA domain
  17. XM_017029588.3XP_016885077.1  protein EOLA2 isoform X1

    UniProtKB/Swiss-Prot
    Q96DE9
    Conserved Domains (1) summary
    smart01022
    Location:6108
    ASCH; The ASCH domain adopts a beta-barrel fold similar to that of the PUA domain
  18. XM_011531180.3XP_011529482.1  protein EOLA2 isoform X1

    See identical proteins and their annotated locations for XP_011529482.1

    UniProtKB/Swiss-Prot
    Q96DE9
    Conserved Domains (1) summary
    smart01022
    Location:6108
    ASCH; The ASCH domain adopts a beta-barrel fold similar to that of the PUA domain
  19. XM_017029589.2XP_016885078.1  protein EOLA2 isoform X1

    UniProtKB/Swiss-Prot
    Q96DE9
    Conserved Domains (1) summary
    smart01022
    Location:6108
    ASCH; The ASCH domain adopts a beta-barrel fold similar to that of the PUA domain
  20. XM_047442175.1XP_047298131.1  protein EOLA2 isoform X1

    UniProtKB/Swiss-Prot
    Q96DE9
  21. XM_047442176.1XP_047298132.1  protein EOLA2 isoform X1

    UniProtKB/Swiss-Prot
    Q96DE9

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060947.1 Alternate T2T-CHM13v2.0

    Range
    148199823..148206117 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001039761.2: Suppressed sequence

    Description
    NM_001039761.2: This RefSeq was permanently suppressed because currently there is support for the transcript but not for the protein.