Format

Send to:

Choose Destination

LOC541472 uncharacterized LOC541472 [ Homo sapiens (human) ]

Gene ID: 541472, updated on 28-Jun-2019

Summary

Gene symbol
LOC541472
Gene description
uncharacterized LOC541472
See related
Ensembl:ENSG00000179428
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Broad expression in gall bladder (RPKM 1.8), urinary bladder (RPKM 1.6) and 20 other tissues See more

Genomic context

See LOC541472 in Genome Data Viewer
Location:
7p15.3
Exon count:
2
Annotation release Status Assembly Chr Location
109.20190607 current GRCh38.p13 (GCF_000001405.39) 7 NC_000007.14 (22725395..22727620, complement)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene CAGE-defined low expression enhancer in LOC100506178-LOC401312 intergenic region Neighboring gene uncharacterized LOC401312 Neighboring gene interleukin 6 Neighboring gene MT-CYB pseudogene 42 Neighboring gene ribosomal protein S26 pseudogene 32

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_131935.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    BC027978, BI912463
    Related
    ENST00000325042.2

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p13 Primary Assembly

    Range
    22725395..22727620 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Support Center